RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 C15orf65H3BRN8 121 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 MOSP00540 346 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 FABP2P12104 132 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 FOLR3P41439 243 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 SSBP2P81877 361 aaPredicted RBP10.28□□□□□ -0.76
SMG8-202ENST00000543872 LINC01545Q5VT33 79 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 AP5S1Q9NUS5 200 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 NAV3Q8IVL0 2385 aa10.28□□□□□ -0.76
SMG8-202ENST00000543872 NEU4Q8WWR8 484 aaPredicted RBP10.28□□□□□ -0.76
SMG8-202ENST00000543872 A0A1W2PPM0 123 aa10.27□□□□□ -0.76
SMG8-202ENST00000543872 MRAP2Q96G30 205 aa10.27□□□□□ -0.76
SMG8-202ENST00000543872 ZNF257Q9Y2Q1 563 aa10.27□□□□□ -0.76
SMG8-202ENST00000543872 IGHV3OR15-7A0A075B7D8 119 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 ACP1P24666 158 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 Q0VFX4 171 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 C10orf113Q5VZT2 155 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 DHRS13Q6UX07 377 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 PSMB11A5LHX3 300 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.27□□□□□ -0.77
SMG8-202ENST00000543872 MAGEA5P43359 124 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 C11orf53Q8IXP5 236 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 CD177Q8N6Q3 437 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 ZNF747Q9BV97 191 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 TMEM14BQ9NUH8 114 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
SMG8-202ENST00000543872 DSPP15924 2871 aaKnown RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 FAM87AP0C7U9 286 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 ORM2P19652 201 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 PRDX2P32119 198 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 IFI27L2Q9H2X8 130 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 TANC2Q9HCD6 1990 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 FTH1P19P0C7X4 201 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 FAM106CPP0CH98 169 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 GCSHP23434 173 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 FAM106AQ4KMX7 169 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 TCTEX1D4Q5JR98 221 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 SAMD5Q5TGI4 173 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 PDPNQ86YL7 162 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 FLYWCH2Q96CP2 140 aaKnown RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 ASCL2Q99929 193 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 EPDR1Q9UM22 224 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 MAP1BP46821 2468 aaKnown RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 CSN1S1P47710 185 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 HERV-K104P63124 156 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 RBPMS2Q6ZRY4 209 aaKnown RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 WFDC3Q8IUB2 231 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 ZNRF1Q8ND25 227 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 OR5A1Q8NGJ0 315 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 KLF14Q8TD94 323 aaPredicted RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 GPR82Q96P67 336 aa10.26□□□□□ -0.77
SMG8-202ENST00000543872 BOKQ9UMX3 212 aaPredicted RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 FOXA2Q9Y261 457 aaPredicted RBP10.26□□□□□ -0.77
SMG8-202ENST00000543872 TEX50A0A1B0GTY4 177 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 MGST3O14880 152 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 TIMM8AO60220 97 aaPredicted RBP10.25□□□□□ -0.77
SMG8-202ENST00000543872 COL8A1P27658 744 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 RBMXL3Q8N7X1 1067 aaKnown RBP10.25□□□□□ -0.77
SMG8-202ENST00000543872 TRAV8-1A0A0A6YYK1 113 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 K7EMI3 77 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 ADAMTSL5Q6ZMM2 481 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
SMG8-202ENST00000543872 LYZL6O75951 148 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 FGF6P10767 208 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 CACNG7P62955 275 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 ATP5G2Q06055 141 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 TNRC6BQ9UPQ9 1833 aaKnown RBP10.24□□□□□ -0.77
SMG8-202ENST00000543872 SAA2P0DJI9 122 aaPredicted RBP10.24□□□□□ -0.77
SMG8-202ENST00000543872 FER1L6-AS2Q96M78 137 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 MRPL32Q9BYC8 188 aaKnown RBP10.24□□□□□ -0.77
SMG8-202ENST00000543872 FCGR2BP31994 310 aaPredicted RBP10.24□□□□□ -0.77
SMG8-202ENST00000543872 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 C7orf69Q9H7B7 122 aa10.24□□□□□ -0.77
SMG8-202ENST00000543872 PTPRBP23467 1997 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 FNDC10F2Z333 226 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 K7ERJ3 54 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 CD69Q07108 199 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 LOXL1Q08397 574 aaPredicted RBP10.23□□□□□ -0.77
SMG8-202ENST00000543872 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 LINC00305Q7Z4B0 112 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 CIARTQ8N365 385 aaPredicted RBP10.23□□□□□ -0.77
SMG8-202ENST00000543872 MTURNQ8N3F0 131 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 RND1Q92730 232 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 ZNRD1Q9P1U0 126 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 JPT1Q9UK76 154 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 ADAMTS20P59510 1910 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 SMAD7O15105 426 aaKnown RBP10.23□□□□□ -0.77
SMG8-202ENST00000543872 ZADH2Q8N4Q0 377 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 PRNDQ9UKY0 176 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 RP1L1Q8IWN7 2480 aaPredicted RBP10.23□□□□□ -0.77
SMG8-202ENST00000543872 VSTM5A8MXK1 200 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 IGKV1-16P04430 117 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
SMG8-202ENST00000543872 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
SMG8-202ENST00000543872 KIR2DS2P43631 304 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms