RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 VWFP04275 2813 aa4.81□□□□□ -1.64
LTBR-212ENST00000543542 WNK1Q9H4A3 2382 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 IGKV3-7A0A075B6H7 116 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 IGHV3-66A0A0C4DH42 116 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 IGHV7-4-1A0A0J9YVY3 117 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 A0A1W2PS18 150 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 TMEM213A2RRL7 107 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 PMS2P5A8MQ11 134 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 PRSS46E5RG02 174 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 FNDC10F2Z333 226 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 H0YIZ8 118 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 CFDP00746 253 aaPredicted RBP4.8□□□□□ -1.64
LTBR-212ENST00000543542 IFNA5P01569 189 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 IGKV1-17P01599 117 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 HNRNPCP07910 306 aaKnown RBP eCLIP4.8□□□□□ -1.64
LTBR-212ENST00000543542 ORM2P19652 201 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 FGF7P21781 194 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 S100A7P31151 101 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 CLINT1Q14677 625 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 CYP2G1PQ6ZSU1 146 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 ZNF546Q86UE3 836 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 OR5C1Q8NGR4 320 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 OR1B1Q8NGR6 318 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 SCGB1C1Q8TD33 95 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 RNF125Q96EQ8 232 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 TRGV9Q99603 122 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 RNF126Q9BV68 326 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 RHPN1-AS1Q9BWJ2 59 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 SMIM3Q9BZL3 60 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 C11orf1Q9H5F2 150 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 ZFAND3Q9H8U3 227 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 SIGLEC8Q9NYZ4 499 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 ZNF256Q9Y2P7 627 aaPredicted RBP4.8□□□□□ -1.64
LTBR-212ENST00000543542 HSPB11Q9Y547 144 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 PKD1L1Q8TDX9 2849 aa4.8□□□□□ -1.64
LTBR-212ENST00000543542 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 IGKV1D-37A0A075B6S9 117 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 C17orf112F2Z3M2 114 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 DNASE2O00115 360 aaPredicted RBP4.79□□□□□ -1.64
LTBR-212ENST00000543542 AGPAT2O15120 278 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 DFFBO76075 338 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 IGLV1-51P01701 117 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 PRB2P02812 416 aaPredicted RBP4.79□□□□□ -1.64
LTBR-212ENST00000543542 OR5G3P0C626 314 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 LINC00869P0C866 280 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 GP9P14770 177 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 GATA2P23769 480 aaPredicted RBP4.79□□□□□ -1.64
LTBR-212ENST00000543542 CAMLGP49069 296 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 EIF2B2P49770 351 aaKnown RBP4.79□□□□□ -1.64
LTBR-212ENST00000543542 AP2S1P53680 142 aaPredicted RBP4.79□□□□□ -1.64
LTBR-212ENST00000543542 SELENOTP62341 195 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 PAFAH1B2P68402 229 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 DEFA6Q01524 100 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 DEFB114Q30KQ6 69 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 BEAN1Q3B7T3 259 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 CD300EQ496F6 205 aaPredicted RBP4.79□□□□□ -1.64
LTBR-212ENST00000543542 DEFB121Q5J5C9 76 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 IL34Q6ZMJ4 242 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 Q6ZNX1 250 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 Q6ZRG5 221 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 S100A7AQ86SG5 101 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 ZNF709Q8N972 641 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 OR2K2Q8NGT1 345 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 PRR25Q96S07 402 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 ARL6Q9H0F7 186 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 DOK5Q9P104 306 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 MLXQ9UH92 298 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 SMPXQ9UHP9 88 aa4.79□□□□□ -1.64
LTBR-212ENST00000543542 WI2-2373I1.2A0A1W2PRP0 233 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 SMLR1H3BR10 107 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 CHEK1O14757 476 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 ARPC5O15511 151 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 COX7A2P2O60397 106 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 MPDU1O75352 247 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 HYPMO75409 117 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 APOHP02749 345 aaPredicted RBP4.78□□□□□ -1.64
LTBR-212ENST00000543542 C8orf88P0DMB2 117 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 LYL1P12980 280 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 TFPI2P48307 235 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 KRTAP10-11P60412 298 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 USF2Q15853 346 aaPredicted RBP4.78□□□□□ -1.64
LTBR-212ENST00000543542 Q5BKY6 102 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 TCF24Q7RTU0 167 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 WFDC3Q8IUB2 231 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 TMEM61Q8N0U2 210 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 GBGT1Q8N5D6 347 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 CHAC2Q8WUX2 184 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 RNF2Q99496 336 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 MGST2Q99735 147 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 ATP5SQ99766 215 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 SLC25A22Q9H936 323 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 HIGD1AQ9Y241 93 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 WDR83OSQ9Y284 106 aa4.78□□□□□ -1.64
LTBR-212ENST00000543542 BORCS7-ASMTA0A0B4J1R7 106 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 TRAV25A0A0B4J276 109 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms