RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TRAV14DV4A0A0A6YYC5 116 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 GCHFRP30047 84 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 GPX4P36969 197 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 OR10D4PQ8NGN7 298 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 Q96MF0 132 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV1D-13A0A0B4J2D9 117 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 GAGE10A6NGK3 116 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 C15orf61A6NNL5 157 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM262E9PQX1 116 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 SOD3P08294 240 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV1-13P0DP09 117 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 CD300CQ08708 224 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 TPTE2P1Q5T6R2 138 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM167AQ8TBQ9 72 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 C2orf88Q9BSF0 95 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 NPCDR1Q9BY65 106 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV1-12A0A0C4DH73 117 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV1D-12P01611 117 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 HLA-DRB1P01911 266 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 CEACAM8P31997 349 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 H2BFSP57053 126 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 FAM3BP58499 235 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 PVRIGQ6DKI7 326 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 HIST1H2BAQ96A08 127 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 SH3BGRL3Q9H299 93 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 RNF114Q9Y508 228 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 PHF3Q92576 2039 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV3OR2-268A0A0C4DH90 116 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 H7C1H1 209 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 PSPNO60542 156 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 MT-ND6P03923 174 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 CXCL2P19875 107 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 JKAMPQ9P055 326 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF324O75467 553 aaPredicted RBP5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 PAX8Q06710 450 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 HERPUD1Q15011 391 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 DEFB121Q5J5C9 76 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 RASL11AQ6T310 242 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 KIR2DL4Q99706 377 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 U3KQE9 123 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 M0R3E3 92 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 MAPK1IP1LQ8NDC0 245 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 PGLYRP4Q96LB8 373 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 CLDN16Q9Y5I7 305 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 MYO18BQ8IUG5 2567 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 IGHV1-3A0A0C4DH29 117 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 ASIPP42127 132 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM183BQ1AE95 376 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 C2orf68Q2NKX9 166 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 RARRES2Q99969 163 aa5.69□□□□□ -1.5
SRGAP1-206ENST00000543397 NCOR2Q9Y618 2525 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 A0A087WV48 116 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 B5MCH6 92 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 RBMY1CP0DJD4 496 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 HGFACQ04756 655 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 TCF24Q7RTU0 167 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 CD177Q8N6Q3 437 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 FAM110AQ9BQ89 295 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 M0R381 172 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 DUSP14O95147 198 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 NHLRC3Q5JS37 347 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 HIST2H2BCQ6DN03 193 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 HIST2H2BDQ6DRA6 164 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 SLC50A1Q9BRV3 221 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF257Q9Y2Q1 563 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF585BQ52M93 769 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 RNF5Q99942 180 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 MLNRO43193 412 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 LILRA1O75019 489 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 GCSHP23434 173 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 CFHR2P36980 270 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 PRCDQ00LT1 54 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 RTBDNQ9BSG5 229 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 GATA2P23769 480 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 PRTN3P24158 256 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 SAA4P35542 130 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 NIT1Q86X76 327 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 GAFA1Q96PS6 74 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 TNFRSF18Q9Y5U5 241 aa5.68□□□□□ -1.5
SRGAP1-206ENST00000543397 TNFSF13O75888 250 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 RPL15P61313 204 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 C15orf32Q32M92 178 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 PAPPA-AS1Q5QFB9 102 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 GTSF1LQ9H1H1 148 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 PRSS8Q16651 343 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 CR1LQ2VPA4 569 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF660Q6AZW8 331 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 BAALCQ8WXS3 180 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 PNRC2Q9NPJ4 139 aaKnown RBP5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 SHANK1Q9Y566 2161 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 PSMB2P49721 201 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 TFF3Q07654 80 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 KLHL30-AS1Q8NEE0 82 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 EDA2RQ9HAV5 297 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 ARFGEF3Q5TH69 2177 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms