RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
LTBR-211ENST00000543190 CCDC59Q9P031 241 aaKnown RBP13.46□□□□□ -0.25
LTBR-211ENST00000543190 H3BMM0 161 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 AMBPP02760 352 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
LTBR-211ENST00000543190 SPCS2Q15005 226 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 SIGLEC15Q6ZMC9 328 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 DYNC2LI1Q8TCX1 351 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 NPIPB3Q92617 1050 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 PFDN2Q9UHV9 154 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 SCP2D1Q9UJQ7 156 aa13.45□□□□□ -0.26
LTBR-211ENST00000543190 IGLL5B9A064 214 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 PSG1P11464 419 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 GPX4P36969 197 aaPredicted RBP13.44□□□□□ -0.26
LTBR-211ENST00000543190 SUPT4H1P63272 117 aaKnown RBP13.44□□□□□ -0.26
LTBR-211ENST00000543190 SRPXP78539 464 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 C1orf194Q5T5A4 169 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 ZNF705AQ6ZN79 300 aaPredicted RBP13.44□□□□□ -0.26
LTBR-211ENST00000543190 Q6ZTC4 211 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 GPR141Q7Z602 305 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 OR51G1Q8NGK1 321 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 DIRAS2Q96HU8 199 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
LTBR-211ENST00000543190 DUXBA0A1W2PPF3 345 aa13.43□□□□□ -0.26
LTBR-211ENST00000543190 TMBIM6P55061 237 aa13.43□□□□□ -0.26
LTBR-211ENST00000543190 SMCO1Q147U7 214 aa13.43□□□□□ -0.26
LTBR-211ENST00000543190 CLVS1Q8IUQ0 354 aaPredicted RBP13.43□□□□□ -0.26
LTBR-211ENST00000543190 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
LTBR-211ENST00000543190 RSL24D1Q9UHA3 163 aaKnown RBP13.43□□□□□ -0.26
LTBR-211ENST00000543190 IGHV4-4A0A075B6R2 117 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 SMIM9A6NGZ8 99 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 ZNF705FA8MVS1 300 aaPredicted RBP13.42□□□□□ -0.26
LTBR-211ENST00000543190 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
LTBR-211ENST00000543190 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
LTBR-211ENST00000543190 KLF9Q13886 244 aaPredicted RBP13.42□□□□□ -0.26
LTBR-211ENST00000543190 IL18Q14116 193 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 SPATA31B1PQ5VZV4 182 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 LGI3Q8N145 548 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 DTD1Q8TEA8 209 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 DEDD2Q8WXF8 326 aa13.42□□□□□ -0.26
LTBR-211ENST00000543190 PITX3O75364 302 aa13.41□□□□□ -0.26
LTBR-211ENST00000543190 IFNA10P01566 189 aa13.41□□□□□ -0.26
LTBR-211ENST00000543190 SLC25A6P12236 298 aa13.41□□□□□ -0.26
LTBR-211ENST00000543190 CENPSQ8N2Z9 138 aa13.41□□□□□ -0.26
LTBR-211ENST00000543190 ACY3Q96HD9 319 aa13.41□□□□□ -0.26
LTBR-211ENST00000543190 IGKV1D-37A0A075B6S9 117 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 TMEM189A5PLL7 270 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 GAMTQ14353 236 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 C12orf74Q32Q52 190 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 SAMD13Q5VXD3 122 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 LINC00336Q6ZUF6 198 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 LRTM2Q8N967 370 aa13.4□□□□□ -0.26
LTBR-211ENST00000543190 SLIRPQ9GZT3 109 aaKnown RBP13.4□□□□□ -0.26
LTBR-211ENST00000543190 HERC2O95714 4834 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 SOCS3O14543 225 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 FABP1P07148 127 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 ANXA3P12429 323 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 PSMB3P49720 205 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 PAX9P55771 341 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 FOXI2Q6ZQN5 318 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 LYZL2Q7Z4W2 148 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 FAM210BQ96KR6 192 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 RBKSQ9H477 322 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 SAV1Q9H4B6 383 aaPredicted RBP13.39□□□□□ -0.27
LTBR-211ENST00000543190 CLEC5AQ9NY25 188 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
LTBR-211ENST00000543190 PKHD1P08F94 4074 aa13.38□□□□□ -0.27
LTBR-211ENST00000543190 TEX48A0A1B0GUV7 120 aa13.38□□□□□ -0.27
LTBR-211ENST00000543190 CFDP00746 253 aaPredicted RBP13.38□□□□□ -0.27
LTBR-211ENST00000543190 TMEM128Q5BJH2 165 aa13.38□□□□□ -0.27
LTBR-211ENST00000543190 TRGV9Q99603 122 aa13.38□□□□□ -0.27
LTBR-211ENST00000543190 SLC45A2Q9UMX9 530 aa13.38□□□□□ -0.27
LTBR-211ENST00000543190 DEFB131BA0A096LNP1 70 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 A8MTW9 85 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 ISLRO14498 428 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 P0DMU3 169 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 AKR1C4P17516 323 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 ID1P41134 155 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 ZNF79Q15937 498 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 ZNF709Q8N972 641 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 THAP8Q8NA92 274 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 XCL2Q9UBD3 114 aa13.37□□□□□ -0.27
LTBR-211ENST00000543190 SNRPGP15A8MWD9 76 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 TNFSF8P32971 234 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 OXA1LQ15070 435 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 SLC35E1Q96K37 410 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 KRTAP17-1Q9BYP8 105 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 WDR12Q9GZL7 423 aaKnown RBP13.36□□□□□ -0.27
LTBR-211ENST00000543190 FAT2Q9NYQ8 4349 aa13.36□□□□□ -0.27
LTBR-211ENST00000543190 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
LTBR-211ENST00000543190 ZFP92A6NM28 416 aa13.35□□□□□ -0.27
LTBR-211ENST00000543190 PRSS46E5RG02 174 aa13.35□□□□□ -0.27
LTBR-211ENST00000543190 FAUP35544 74 aaKnown RBP13.35□□□□□ -0.27
LTBR-211ENST00000543190 MEOX2P50222 304 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms