RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 GGACTQ9BVM4 153 aa13.79□□□□□ -0.2
COPS7A-216ENST00000543170 U3KQE9 123 aa13.79□□□□□ -0.2
COPS7A-216ENST00000543170 IGHV3-49A0A0A0MS15 119 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 CCNKO75909 580 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 CFDP00746 253 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-216ENST00000543170 HNRNPCP07910 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
COPS7A-216ENST00000543170 CD7P09564 240 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 IGHV4-30-4P0DP06 118 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-216ENST00000543170 RNF125Q96EQ8 232 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 LYRM2Q9NU23 88 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-216ENST00000543170 C19orf73Q9NVV2 129 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 SELENOKQ9Y6D0 94 aa13.78□□□□□ -0.2
COPS7A-216ENST00000543170 OR4C46A6NHA9 309 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 DEDDO75618 318 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 SIX6O95475 246 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 TGP01266 2768 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 APOHP02749 345 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-216ENST00000543170 CAV2P51636 162 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 H2BFSP57053 126 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 ZNF90Q03938 601 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 RGS21Q2M5E4 152 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 MGAT4CQ9UBM8 478 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 RABAC1Q9UI14 185 aa13.77□□□□□ -0.21
COPS7A-216ENST00000543170 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 FRMD6-AS1P0C7T7 363 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 BCAP31P51572 246 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 TCF24Q7RTU0 167 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 GRAMD2BQ96HH9 432 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 NPVFQ9HCQ7 196 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 ALG5Q9Y673 324 aa13.76□□□□□ -0.21
COPS7A-216ENST00000543170 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
COPS7A-216ENST00000543170 SMCO3A2RU48 225 aa13.75□□□□□ -0.21
COPS7A-216ENST00000543170 P2RY1P47900 373 aa13.75□□□□□ -0.21
COPS7A-216ENST00000543170 EIF2B2P49770 351 aaKnown RBP13.75□□□□□ -0.21
COPS7A-216ENST00000543170 RRAS2P62070 204 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-216ENST00000543170 ARL16Q0P5N6 197 aa13.75□□□□□ -0.21
COPS7A-216ENST00000543170 PFDN2Q9UHV9 154 aa13.75□□□□□ -0.21
COPS7A-216ENST00000543170 OR11H12B2RN74 326 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 RLN2P04090 185 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 SULT1A1P50225 295 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 PAFAH1B2P68402 229 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 STX12Q86Y82 276 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 LILRB2Q8N423 598 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 TMEM252Q8N6L7 170 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 BPIFCQ8NFQ6 507 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 GLMPQ8WWB7 406 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 SLC45A2Q9UMX9 530 aa13.74□□□□□ -0.21
COPS7A-216ENST00000543170 IGHV3-66A0A0C4DH42 116 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 FAM24AA6NFZ4 105 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 E5RGE8 158 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 BUB3O43684 328 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 DFFBO76075 338 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 NHLRC4P0CG21 123 aaPredicted RBP13.73□□□□□ -0.21
COPS7A-216ENST00000543170 PET100P0DJ07 73 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 LYZP61626 148 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 SELENOTP62341 195 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 SLC38A11Q08AI6 406 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 OXA1LQ15070 435 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 TEPPQ6URK8 271 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 C16orf54Q6UWD8 224 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 CYP2G1PQ6ZSU1 146 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 PPP1R1CQ8WVI7 109 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 PBDC1Q9BVG4 233 aa13.73□□□□□ -0.21
COPS7A-216ENST00000543170 IGSF23A1L1A6 192 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 HELTA6NFD8 242 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 HBG1P69891 147 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 HBG2P69892 147 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 OR2F1Q13607 317 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 LRRC37A5PQ49AS3 106 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 WFDC10AQ9H1F0 79 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 TUBA4BQ9H853 241 aa13.72□□□□□ -0.21
COPS7A-216ENST00000543170 CST7O76096 145 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 S100A11P31949 105 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 AP2S1P53680 142 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-216ENST00000543170 CMC4P56277 68 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-216ENST00000543170 ODF3L2Q3SX64 289 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 C1orf194Q5T5A4 169 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 LINC00322Q6ZN03 302 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-216ENST00000543170 DEFB125Q8N687 156 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 MS4A6AQ9H2W1 248 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 OR5AC2Q9NZP5 309 aa13.71□□□□□ -0.21
COPS7A-216ENST00000543170 HUWE1Q7Z6Z7 4374 aaKnown RBP13.7□□□□□ -0.22
COPS7A-216ENST00000543170 H0YIZ8 118 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 S100A7P31151 101 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 PLP1P60201 277 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 BAXQ07812 192 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 ZNF546Q86UE3 836 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 TMEM147Q9BVK8 224 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 SLC25A31Q9H0C2 315 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 UQCC1Q9NVA1 299 aa13.7□□□□□ -0.22
COPS7A-216ENST00000543170 DNASE2O00115 360 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-216ENST00000543170 MPC2O95563 127 aa13.69□□□□□ -0.22
COPS7A-216ENST00000543170 RPL11P62913 178 aaKnown RBP13.69□□□□□ -0.22
COPS7A-216ENST00000543170 ATP6V1FQ16864 119 aa13.69□□□□□ -0.22
COPS7A-216ENST00000543170 TMEM182Q6ZP80 229 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms