RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 OR51G1Q8NGK1 321 aa8.72□□□□□ -1.01
PTPN6-220ENST00000543115 BCL7BQ9BQE9 202 aa8.72□□□□□ -1.01
PTPN6-220ENST00000543115 HRH4Q9H3N8 390 aa8.72□□□□□ -1.01
PTPN6-220ENST00000543115 RSL24D1Q9UHA3 163 aaKnown RBP8.72□□□□□ -1.01
PTPN6-220ENST00000543115 SHPKQ9UHJ6 478 aa8.72□□□□□ -1.01
PTPN6-220ENST00000543115 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
PTPN6-220ENST00000543115 FRAS1Q86XX4 4008 aa8.71□□□□□ -1.01
PTPN6-220ENST00000543115 IGKV1D-37A0A075B6S9 117 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 FABP12A6NFH5 140 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 HLA-DMBP28068 263 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 AP2S1P53680 142 aaPredicted RBP8.71□□□□□ -1.02
PTPN6-220ENST00000543115 DEFB1P60022 68 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF90Q03938 601 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 GSG1LQ6UXU4 331 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 SIGLEC15Q6ZMC9 328 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 Q6ZTC4 211 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 NOXA1Q86UR1 476 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 RNF125Q96EQ8 232 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 SCGB3A2Q96PL1 93 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 NRN1Q9NPD7 142 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 CELA1Q9UNI1 258 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 U3KQ87 197 aa8.71□□□□□ -1.02
PTPN6-220ENST00000543115 H3BMM0 161 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 KLF9Q13886 244 aaPredicted RBP8.7□□□□□ -1.02
PTPN6-220ENST00000543115 GAMTQ14353 236 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 MCFD2Q8NI22 146 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 TRIM63Q969Q1 353 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 CACFD1Q9UGQ2 172 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 TBC1D24Q9ULP9 559 aa8.7□□□□□ -1.02
PTPN6-220ENST00000543115 ZFP92A6NM28 416 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 C11orf94C9JXX5 98 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 PITX3O75364 302 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 TCTAP57738 103 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 SNRPD3P62318 126 aaKnown RBP8.69□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF767PQ75MW2 155 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 TMED4Q7Z7H5 227 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 OR1S1Q8NH92 325 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
PTPN6-220ENST00000543115 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
PTPN6-220ENST00000543115 XCL2Q9UBD3 114 aa8.69□□□□□ -1.02
PTPN6-220ENST00000543115 DNAH10Q8IVF4 4471 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 AGRNO00468 2067 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 IGKV1OR2-108A0A075B7D4 117 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 TRAV10A0A0B4J240 114 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 IAPPP10997 89 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 ANXA3P12429 323 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 HLA-DRB4P13762 266 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 GPX4P36969 197 aaPredicted RBP8.68□□□□□ -1.02
PTPN6-220ENST00000543115 SRPXP78539 464 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF79Q15937 498 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 SCRT1Q9BWW7 348 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 V9GYH0 126 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 HLA-DRB4X5D2U9 266 aa8.68□□□□□ -1.02
PTPN6-220ENST00000543115 IGHV4-4A0A075B6R2 117 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 SOCS3O14543 225 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 NOL3O60936 208 aaKnown RBP8.67□□□□□ -1.02
PTPN6-220ENST00000543115 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 NKX2-1P43699 371 aaPredicted RBP8.67□□□□□ -1.02
PTPN6-220ENST00000543115 FXYD7P58549 80 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 LYZP61626 148 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 OR2F1Q13607 317 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 TMEM128Q5BJH2 165 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 OR8G2PQ6IF36 304 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 SLC35E1Q96K37 410 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
PTPN6-220ENST00000543115 DUXBA0A1W2PPF3 345 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 VAMP1P23763 118 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
PTPN6-220ENST00000543115 ATP5IP56385 69 aaPredicted RBP8.66□□□□□ -1.02
PTPN6-220ENST00000543115 NUTF2P61970 127 aaKnown RBP8.66□□□□□ -1.02
PTPN6-220ENST00000543115 PYDC2Q56P42 97 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF705AQ6ZN79 300 aaPredicted RBP8.66□□□□□ -1.02
PTPN6-220ENST00000543115 TOMM5Q8N4H5 51 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 LRTM2Q8N967 370 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 LINC00052Q96N35 136 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 SAV1Q9H4B6 383 aaPredicted RBP8.66□□□□□ -1.02
PTPN6-220ENST00000543115 DNAH6Q9C0G6 4158 aa8.66□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF705FA8MVS1 300 aaPredicted RBP8.65□□□□□ -1.02
PTPN6-220ENST00000543115 SNRPGP15A8MWD9 76 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 PRSS46E5RG02 174 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF705DP0CH99 300 aaPredicted RBP8.65□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF705BP0CI00 300 aaPredicted RBP8.65□□□□□ -1.02
PTPN6-220ENST00000543115 NUP62P37198 522 aaPredicted RBP8.65□□□□□ -1.02
PTPN6-220ENST00000543115 PPP1R1AQ13522 171 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 ZNF709Q8N972 641 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 THAP8Q8NA92 274 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 TRGV9Q99603 122 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 MAGT1Q9H0U3 335 aa8.65□□□□□ -1.02
PTPN6-220ENST00000543115 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.02
PTPN6-220ENST00000543115 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 DEFB131BA0A096LNP1 70 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 F6UB75 175 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 WRBO00258 174 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 SFT2D2O95562 160 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 SLC25A6P12236 298 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 PSMB3P49720 205 aa8.64□□□□□ -1.03
PTPN6-220ENST00000543115 AP3S2P59780 193 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms