RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 PSG1P11464 419 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 NKX2-1P43699 371 aaPredicted RBP12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 POM121L12Q8N7R1 296 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 PRRT1Q99946 306 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 TMEM56-RWDD3S4R434 201 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 U3KQ87 197 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 TMEM189A5PLL7 270 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 ID1P41134 155 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 TMBIM6P55061 237 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 KLF9Q13886 244 aaPredicted RBP12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 SMIM4Q8WVI0 70 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 IL22RA2Q969J5 263 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
PPP1CA-210ENST00000542876 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 EMP1P54849 157 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 SPCS2Q15005 226 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 LGI3Q8N145 548 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 OR4C16Q8NGL9 310 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 DTD1Q8TEA8 209 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 RAB2BQ8WUD1 216 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 SCGB3A2Q96PL1 93 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 NEU1Q99519 415 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 DNAH6Q9C0G6 4158 aa12.51□□□□□ -0.41
PPP1CA-210ENST00000542876 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 ZFP92A6NM28 416 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 H3BMQ9 156 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 FABP1P07148 127 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 CCR6P51684 374 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 IL18Q14116 193 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 OR8G2PQ6IF36 304 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 OR51S1Q8NGJ8 323 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 RABL2AQ9UBK7 228 aaPredicted RBP12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 SCP2D1Q9UJQ7 156 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 RABL2BQ9UNT1 228 aa12.5□□□□□ -0.41
PPP1CA-210ENST00000542876 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 CTDSP2O14595 271 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 IFNA21P01568 189 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 ATP5IP56385 69 aaPredicted RBP12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 ZNF705AQ6ZN79 300 aaPredicted RBP12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 DIRAS2Q96HU8 199 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 SLC35E1Q96K37 410 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 HSPB7Q9UBY9 170 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 RFNGQ9Y644 331 aa12.49□□□□□ -0.41
PPP1CA-210ENST00000542876 M0R2N4 97 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 CTDSPLO15194 276 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 ANXA3P12429 323 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 FXYD7P58549 80 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 UBE2DNLQ8IWF7 75 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 OR4B1Q8NGF8 309 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 PPP1R14BQ96C90 147 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 RBKSQ9H477 322 aa12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 SAV1Q9H4B6 383 aaPredicted RBP12.48□□□□□ -0.41
PPP1CA-210ENST00000542876 KIAA1109Q2LD37 5005 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 A0A0B4J2A0 478 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 PIGBOS1A0A0B4J2F0 54 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 PRSS29PA6NIE9 313 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 ZNF705FA8MVS1 300 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 ZNF705DP0CH99 300 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 ZNF705BP0CI00 300 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 AKR1C4P17516 323 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 PSMB3P49720 205 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 LYZP61626 148 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 SRPXP78539 464 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 C1orf194Q5T5A4 169 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 GDF5OSQ5U4N7 250 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 DYNC2LI1Q8TCX1 351 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 FAM210BQ96KR6 192 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 SHPKQ9UHJ6 478 aa12.47□□□□□ -0.41
PPP1CA-210ENST00000542876 SNRPGP15A8MWD9 76 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 ZNF701M0R085 212 aaPredicted RBP12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 SUPT4H1P63272 117 aaKnown RBP12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 ZNF90Q03938 601 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 GAMTQ14353 236 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 EBLN2Q6P2I7 272 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 LYZL2Q7Z4W2 148 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 MCUBQ9NWR8 336 aa12.46□□□□□ -0.41
PPP1CA-210ENST00000542876 GOLT1BQ9Y3E0 138 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms