RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 KLK9Q2XQG4 91 aa11.16□□□□□ -0.62
LDB3-207ENST00000542786 FAM168AQ92567 244 aa11.16□□□□□ -0.62
LDB3-207ENST00000542786 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
LDB3-207ENST00000542786 PIMREGQ9BSJ6 248 aa11.16□□□□□ -0.62
LDB3-207ENST00000542786 KLK9Q9UKQ9 250 aa11.16□□□□□ -0.62
LDB3-207ENST00000542786 ABCA1O95477 2261 aa11.15□□□□□ -0.62
LDB3-207ENST00000542786 NDUFS8O00217 210 aa11.15□□□□□ -0.62
LDB3-207ENST00000542786 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
LDB3-207ENST00000542786 S100A6P06703 90 aa11.15□□□□□ -0.62
LDB3-207ENST00000542786 S100PP25815 95 aa11.15□□□□□ -0.62
LDB3-207ENST00000542786 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
LDB3-207ENST00000542786 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.62
LDB3-207ENST00000542786 CACNA1BQ00975 2339 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 MDFIC2A0A1B0GVS7 189 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 HELTA6NFD8 242 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.63
LDB3-207ENST00000542786 FAM106CPP0CH98 169 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 HOXA5P20719 270 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 HNF1AP20823 631 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 FOXL1Q12952 345 aa11.15□□□□□ -0.63
LDB3-207ENST00000542786 RBM14Q96PK6 669 aaKnown RBP11.15□□□□□ -0.63
LDB3-207ENST00000542786 ZFYVE26Q68DK2 2539 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 IFITM10A6NMD0 228 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 AKR1D1P51857 326 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
LDB3-207ENST00000542786 OR10G8Q8NGN5 311 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 HIGD1AQ9Y241 93 aa11.14□□□□□ -0.63
LDB3-207ENST00000542786 IGHV4-30-2A0A087WSY4 118 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 GNG4P50150 75 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 FAM3BP58499 235 aaPredicted RBP11.13□□□□□ -0.63
LDB3-207ENST00000542786 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 CDC42EP3Q9UKI2 254 aa11.13□□□□□ -0.63
LDB3-207ENST00000542786 WI2-2373I1.2A0A1W2PRP0 233 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 TOMM40O96008 361 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 GCGP01275 180 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 RD3LP0DJH9 198 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 PAX1P15863 534 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 BRS3P32247 399 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 LYZP61626 148 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 LEMD1Q68G75 181 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 ZNF843Q8N446 348 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
LDB3-207ENST00000542786 C1RLQ9NZP8 487 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 V9GYV3 84 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 PEX7O00628 323 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 NDUFB8O95169 186 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 ATP5J2P56134 94 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 TAS2R60P59551 318 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
LDB3-207ENST00000542786 OR5I1Q13606 314 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 SGMS2Q8NHU3 365 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
LDB3-207ENST00000542786 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 H3BRN7 92 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
LDB3-207ENST00000542786 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 ZNF491Q8N8L2 437 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 PIFOQ8TCI5 191 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 IL36BQ9NZH7 164 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 KLF12Q9Y4X4 402 aa11.11□□□□□ -0.63
LDB3-207ENST00000542786 ZNF462Q96JM2 2506 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 SLC17A3O00476 420 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 FABP1P07148 127 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
LDB3-207ENST00000542786 NDUFA6P56556 154 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 S4R3C0 116 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 ZNF98A6NK75 572 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 MRPS12O15235 138 aaKnown RBP11.1□□□□□ -0.63
LDB3-207ENST00000542786 FCGR2BP31994 310 aaPredicted RBP11.1□□□□□ -0.63
LDB3-207ENST00000542786 CDX1P47902 265 aaPredicted RBP11.1□□□□□ -0.63
LDB3-207ENST00000542786 MFAP4P55083 255 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 GNG5P63218 68 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 FAM110DQ8TAY7 271 aaPredicted RBP11.1□□□□□ -0.63
LDB3-207ENST00000542786 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 EPDR1Q9UM22 224 aa11.1□□□□□ -0.63
LDB3-207ENST00000542786 MYO18BQ8IUG5 2567 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 TRAV30A0A087WSZ9 112 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 ISLRO14498 428 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 S100A8P05109 93 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 MEOX2P50222 304 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
LDB3-207ENST00000542786 C5orf56Q8N8D9 126 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 NRGNQ92686 78 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms