RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
NECAP1-206ENST00000542095 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
NECAP1-206ENST00000542095 SLC17A3O00476 420 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 GOSR1O95249 250 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 PDLIM4P50479 330 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 RPL15P61313 204 aaKnown RBP8.57□□□□□ -1.04
NECAP1-206ENST00000542095 FBLN7Q53RD9 439 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 RBM14Q96PK6 669 aaKnown RBP8.57□□□□□ -1.04
NECAP1-206ENST00000542095 OSTCQ9NRP0 149 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 V9GYV3 84 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 NPIPB5A8MRT5 1133 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 ISLRO14498 428 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 NBEAP1P0C6P0 100 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 RD3LP0DJH9 198 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 MGST1P10620 155 aaKnown RBP8.57□□□□□ -1.04
NECAP1-206ENST00000542095 MYCNOSP40205 109 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
NECAP1-206ENST00000542095 CX3CL1P78423 397 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 TMEM183AQ8IXX5 376 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 BLNKQ8WV28 456 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 TBX15Q96SF7 602 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 GPR61Q9BZJ8 451 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 WNK2Q9Y3S1 2297 aa8.57□□□□□ -1.04
NECAP1-206ENST00000542095 XKRY2A2RUG3 117 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 IGLV2-8P01709 118 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 FAM106CPP0CH98 169 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 GP9P14770 177 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 LPAR2Q9HBW0 351 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
NECAP1-206ENST00000542095 S100A12P80511 92 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 RPL19P84098 196 aaKnown RBP8.56□□□□□ -1.04
NECAP1-206ENST00000542095 COA6Q5JTJ3 125 aaKnown RBP8.56□□□□□ -1.04
NECAP1-206ENST00000542095 IBA57Q5T440 356 aaKnown RBP8.56□□□□□ -1.04
NECAP1-206ENST00000542095 TTC9CQ8N5M4 171 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 SLC25A39Q9BZJ4 359 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-206ENST00000542095 RNASE7Q9H1E1 156 aaKnown RBP8.56□□□□□ -1.04
NECAP1-206ENST00000542095 NIT2Q9NQR4 276 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 EPDR1Q9UM22 224 aa8.56□□□□□ -1.04
NECAP1-206ENST00000542095 TRAV30A0A087WSZ9 112 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 PGPA6NDG6 321 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 HIST1H1BP16401 226 aaKnown RBP8.55□□□□□ -1.04
NECAP1-206ENST00000542095 BRS3P32247 399 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 OR10D4PQ8NGN7 298 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 LINC00479Q96M42 142 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 IGLV11-55A0A075B6I3 123 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 TOMM40O96008 361 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
NECAP1-206ENST00000542095 FABP4P15090 132 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 YPEL3P61236 119 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-206ENST00000542095 TMEM183BQ1AE95 376 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 LEMD1Q68G75 181 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 BAGE2Q86Y30 109 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 THYN1Q9P016 225 aa8.55□□□□□ -1.04
NECAP1-206ENST00000542095 MRPL27Q9P0M9 148 aaKnown RBP8.55□□□□□ -1.04
NECAP1-206ENST00000542095 GNG7O60262 68 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 SAA4P35542 130 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 MFAP4P55083 255 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 UBE2G1P62253 170 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 GNG5P63218 68 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 NDPQ00604 133 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 KLF17Q5JT82 389 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-206ENST00000542095 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 ZNF48Q96MX3 618 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-206ENST00000542095 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 CCL19Q99731 98 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 POLR3KQ9Y2Y1 108 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-206ENST00000542095 TRAV34A0A0B4J273 112 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 OR8I2Q8N0Y5 310 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 Q8N9W7 124 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 NHLRC2Q8NBF2 726 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 TMEM68Q96MH6 324 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 Q9H3A6 140 aa8.54□□□□□ -1.04
NECAP1-206ENST00000542095 IGHV7-81A0A0B4J1V7 117 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 ZNF705GA8MUZ8 300 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-206ENST00000542095 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
NECAP1-206ENST00000542095 S100A7AQ86SG5 101 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 RNF125Q96EQ8 232 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 SMIM12Q96EX1 92 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 AJUBAQ96IF1 538 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 HIST1H2BLQ99880 126 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 ATG101Q9BSB4 218 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 SHANK2-AS3Q9BTD1 123 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 SERTAD4Q9NUC0 356 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 RNF24Q9Y225 148 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 ITPR1Q14643 2758 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 TRBV9A0A0B4J1U6 114 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 H3BRN7 92 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 NPFFO15130 113 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 HLA-DRB1P01911 266 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 PYY3Q5JQD4 70 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 FAM120AOSQ5T036 256 aa8.53□□□□□ -1.04
NECAP1-206ENST00000542095 FAM231DQ6ZW35 169 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms