RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 ZNRD1Q9P1U0 126 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 FER1L5A0AVI2 2057 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 PLXND1Q9Y4D7 1925 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM42Q69YG0 159 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 CYB561D1Q8N8Q1 229 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 GGACTQ9BVM4 153 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 PLXNA2O75051 1894 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 IGKV1D-13A0A0B4J2D9 117 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 A8MWL6 223 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 IGKV1-13P0DP09 117 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 NAT1P18440 290 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 RNF144BQ7Z419 303 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 DOCK9Q9BZ29 2069 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 C7orf77A4D0Y5 90 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 GATA2P23769 480 aaPredicted RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 FOXE3Q13461 319 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 A0A1B0GWJ7 208 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 PRR32B1ATL7 298 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 ZNF324O75467 553 aaPredicted RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 AMBPP02760 352 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 DANCRP0C864 163 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 GCSHP23434 173 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 BBC3Q96PG8 261 aaPredicted RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 SRSF4Q08170 494 aaKnown RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 IQCJQ1A5X6 159 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 TCF23Q7RTU1 214 aa6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 BCL6BQ8N143 479 aaPredicted RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 HEATR1Q9H583 2144 aaKnown RBP6.98□□□□□ -1.29
FNDC3A-206ENST00000541916 NTF4P34130 210 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 ZNF383Q8NA42 475 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 F11RQ9Y624 299 aaKnown RBP6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 ZNF253O75346 499 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 C2orf83Q53S99 150 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 SCN8AQ9UQD0 1980 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 CNTFRP26992 372 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 CKS2P33552 79 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 OR8A1Q8NGG7 326 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 RTBDNQ9BSG5 229 aaPredicted RBP6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 MAP1LC3CQ9BXW4 147 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 PCNX1Q96RV3 2341 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 BTF3P20290 206 aaKnown RBP6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 NCOR2Q9Y618 2525 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 LINC00862A6NCI5 91 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 CGB7P0DN87 165 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 UCP1P25874 307 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 DHRS11Q6UWP2 260 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM144Q7Z5S9 345 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 PGLYRP4Q96LB8 373 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 AQP10Q96PS8 301 aa6.97□□□□□ -1.29
FNDC3A-206ENST00000541916 SCGB1C2P0DMR2 95 aa6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 OTX1P32242 354 aaPredicted RBP6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 LURAP1LQ8IV03 231 aa6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 CITED2Q99967 270 aaPredicted RBP6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 CTSZQ9UBR2 303 aa6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 MDKP21741 143 aaPredicted RBP6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 Q5BKY6 102 aa6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 C9orf139Q6ZV77 190 aa6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 PIFOQ8TCI5 191 aa6.96□□□□□ -1.29
FNDC3A-206ENST00000541916 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 IBA57Q5T440 356 aaKnown RBP6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 C19orf35Q6ZS72 473 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 PRO1933Q9H354 126 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 Q9H3A6 140 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 MED12Q93074 2177 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 ZNF407Q9C0G0 2248 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 LOC102724200A0A096LPH7 203 aaPredicted RBP6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 TRAV34A0A0B4J273 112 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 J3QRE1 110 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 NDUFA11Q86Y39 141 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 SRSF8Q9BRL6 282 aaKnown RBP6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 MRPL27Q9P0M9 148 aaKnown RBP6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 HIVEP2P31629 2446 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 TRAV12-3A0A0B4J271 114 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 GCGP01275 180 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 TCTAP57738 103 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 ALPK3Q96L96 1907 aa6.96□□□□□ -1.3
FNDC3A-206ENST00000541916 PPP1R17O96001 155 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 HOXD3P31249 432 aaPredicted RBP6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 TFF3Q07654 80 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 TMEM183BQ1AE95 376 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 TMEM183AQ8IXX5 376 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 SMR3AQ99954 134 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 A0A0A6YYD4 124 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 CRYBB3P26998 211 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 H3BUA1 57 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 CFHR3Q02985 330 aa6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 RPL29P47914 159 aaKnown RBP6.95□□□□□ -1.3
FNDC3A-206ENST00000541916 SLURP1P55000 103 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms