RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 A0A1B0GW64 132 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 A0A1W2PN81 502 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 CGB1A6NKQ9 187 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 J3QLI3 93 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 FAM106CPP0CH98 169 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 IGHV4-31P0DP07 118 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 MAS1LP35410 378 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 EBI3Q14213 229 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 TMEM241Q24JQ0 296 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 C16orf54Q6UWD8 224 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 OR10W1Q8NGF6 305 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
THBS3-210ENST00000541576 NDUFA3O95167 84 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 AVPP01185 164 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 HBE1P02100 147 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 TMEM11P17152 192 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 NPY1RP25929 384 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 GNB1P62873 340 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 TEX15Q9BXT5 2789 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 CA2P00918 260 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 GCGP01275 180 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 RPL27AP46776 148 aaKnown RBP6.92□□□□□ -1.3
THBS3-210ENST00000541576 COMPP49747 757 aaPredicted RBP6.92□□□□□ -1.3
THBS3-210ENST00000541576 SLC35B1P78383 322 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 ERHP84090 104 aaKnown RBP6.92□□□□□ -1.3
THBS3-210ENST00000541576 ATP6V1FQ16864 119 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 FAM120AOSQ5T036 256 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 Q8N6K4 173 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 WFDC11Q8NEX6 87 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
THBS3-210ENST00000541576 GNPNAT1Q96EK6 184 aaPredicted RBP6.92□□□□□ -1.3
THBS3-210ENST00000541576 HSPB9Q9BQS6 159 aa6.92□□□□□ -1.3
THBS3-210ENST00000541576 NCBP2LA6PVI3 153 aaKnown RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 INS-IGF2F8WCM5 200 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 FCN1O00602 326 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 CNN1P51911 297 aaKnown RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 COTL1Q14019 142 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 C5orf64Q2M2E5 130 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 KLF17Q5JT82 389 aaPredicted RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 RCC1LQ96I51 464 aaKnown RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 TXN2Q99757 166 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 ACTR3CQ9C0K3 210 aaPredicted RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 SRD5A3Q9H8P0 318 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 ATP5IP56385 69 aaPredicted RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 ZNF726P1Q15940 193 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 BAGE2Q86Y30 109 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 TMEM147Q9BVK8 224 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 PRSS46E5RG02 174 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 CNIH1O95406 144 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 RPL23P62829 140 aaKnown RBP6.91□□□□□ -1.3
THBS3-210ENST00000541576 LRRC75BQ2VPJ9 315 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 KIAA1644Q3SXP7 199 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 PARLQ9H300 379 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 C1RLQ9NZP8 487 aa6.91□□□□□ -1.3
THBS3-210ENST00000541576 ZNF469Q96JG9 3925 aaPredicted RBP6.9□□□□□ -1.3
THBS3-210ENST00000541576 PAGE4O60829 102 aa6.9□□□□□ -1.3
THBS3-210ENST00000541576 PMCHP20382 165 aa6.9□□□□□ -1.3
THBS3-210ENST00000541576 HINT1P49773 126 aaPredicted RBP6.9□□□□□ -1.3
THBS3-210ENST00000541576 SSBP2P81877 361 aaPredicted RBP6.9□□□□□ -1.3
THBS3-210ENST00000541576 C2orf83Q53S99 150 aa6.9□□□□□ -1.3
THBS3-210ENST00000541576 SRSF12Q8WXF0 261 aaKnown RBP6.9□□□□□ -1.3
THBS3-210ENST00000541576 FOXC2Q99958 501 aa6.9□□□□□ -1.3
THBS3-210ENST00000541576 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
THBS3-210ENST00000541576 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.3
THBS3-210ENST00000541576 F2Z2F3 143 aa6.9□□□□□ -1.31
THBS3-210ENST00000541576 RNASE2P10153 161 aaKnown RBP6.9□□□□□ -1.31
THBS3-210ENST00000541576 CBLN1P23435 193 aa6.9□□□□□ -1.31
THBS3-210ENST00000541576 CMTM2Q8TAZ6 248 aa6.9□□□□□ -1.31
THBS3-210ENST00000541576 DERL1Q9BUN8 251 aa6.9□□□□□ -1.31
THBS3-210ENST00000541576 WDR61Q9GZS3 305 aaKnown RBP6.9□□□□□ -1.31
THBS3-210ENST00000541576 WNT10AQ9GZT5 417 aa6.9□□□□□ -1.31
THBS3-210ENST00000541576 MEGF9Q9H1U4 602 aa6.9□□□□□ -1.31
THBS3-210ENST00000541576 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.31
THBS3-210ENST00000541576 IGLC7A0M8Q6 106 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 C20orf202A1L168 122 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 RAB4AP20338 218 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 NTF3P20783 257 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 VWC2Q2TAL6 325 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 PARD6GQ9BYG4 376 aaPredicted RBP6.89□□□□□ -1.31
THBS3-210ENST00000541576 NAT8Q9UHE5 227 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 SOX21Q9Y651 276 aaPredicted RBP6.89□□□□□ -1.31
THBS3-210ENST00000541576 ACANP16112 2415 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 APELAP0DMC3 54 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 OR10J1P30954 320 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 SUB1P53999 127 aaKnown RBP eCLIP6.89□□□□□ -1.31
THBS3-210ENST00000541576 CD81P60033 236 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 ASPHD1Q5U4P2 390 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 TAF15Q92804 592 aaKnown RBP eCLIP6.89□□□□□ -1.31
THBS3-210ENST00000541576 VAX2Q9UIW0 290 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 B4DEV8 164 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 TEX22C9J3V5 150 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 REG1AP05451 166 aa6.89□□□□□ -1.31
THBS3-210ENST00000541576 PFN1P07737 140 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms