RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 MARCH1Q8TCQ1 289 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 GLYATL2Q8WU03 294 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 TP53RKQ96S44 253 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 SPAG8Q99932 426 aaPredicted RBP4.28□□□□□ -1.72
SUDS3-202ENST00000541280 FAM110AQ9BQ89 295 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 NEURL2Q9BR09 285 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 RTBDNQ9BSG5 229 aaPredicted RBP4.28□□□□□ -1.72
SUDS3-202ENST00000541280 DAZ1Q9NQZ3 744 aaKnown RBP4.28□□□□□ -1.72
SUDS3-202ENST00000541280 TRAV14DV4A0A0A6YYC5 116 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 A0A0B4J2A0 478 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 DUXBA0A1W2PPF3 345 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM213A2RRL7 107 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 NAP1L6A6NFF2 107 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 OR2T8A6NH00 312 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 OR11H12B2RN74 326 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 I3L2K1 104 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 K7EIM0 57 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 TSPAN4O14817 238 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 ST8SIA3O43173 380 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 GNG7O60262 68 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 MT-CO2P00403 227 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 IGKV1-5P01602 117 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 IGHV3-23P01764 117 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 CTSGP08311 255 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 OR5AC1P0C628 307 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 P0C879 139 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 ETV6P41212 452 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 CCR6P51684 374 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 PPP5CP53041 499 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 CD81P60033 236 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 PAFAH1B2P68402 229 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 GUCA2BQ16661 112 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 SP6Q3SY56 376 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 PYDC2Q56P42 97 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM128Q5BJH2 165 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 ADAMTSL5Q6ZMM2 481 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 SBSPONQ8IVN8 264 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 SELENOHQ8IZQ5 122 aaKnown RBP4.27□□□□□ -1.73
SUDS3-202ENST00000541280 LGI3Q8N145 548 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 OR4D10Q8NGI6 311 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 OR4C16Q8NGL9 310 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 RNASEH2CQ8TDP1 164 aaKnown RBP4.27□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM190Q8WZ59 177 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 OR10C1Q96KK4 312 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 ASCL2Q99929 193 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 ARPC5LQ9BPX5 153 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 TM2D3Q9BRN9 247 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 GINS3Q9BRX5 216 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM231Q9H6L2 316 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 MCUBQ9NWR8 336 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 SHPKQ9UHJ6 478 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 U3KQ87 197 aa4.27□□□□□ -1.73
SUDS3-202ENST00000541280 NOTCH3Q9UM47 2321 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 MEGF8Q7Z7M0 2845 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 A0A1B0GU03 582 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 OR4C46A6NHA9 309 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 CENPXA8MT69 81 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 UBE2CO00762 179 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 YIF1AO95070 293 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SULT1A3P0DMM9 295 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SULT1A4P0DMN0 295 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SLC25A4P12235 298 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SLC25A6P12236 298 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 INPP1P49441 399 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 HOXA1P49639 335 aaPredicted RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 EIF2B2P49770 351 aaKnown RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 MFAP2P55001 183 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 UBE2MP61081 183 aaKnown RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 RPP30P78346 268 aaKnown RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 DEFA5Q01523 94 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 C2orf83Q53S99 150 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 LINC00322Q6ZN03 302 aaPredicted RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 CCDC190Q86UF4 302 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 UBAC2Q8NBM4 344 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM116Q8NCL8 245 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 OR52B4Q8NGK2 314 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 OR4X1Q8NH49 305 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 GPR146Q96CH1 333 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 NARS2Q96I59 477 aaKnown RBP4.26□□□□□ -1.73
SUDS3-202ENST00000541280 RCHY1Q96PM5 261 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 SMPXQ9UHP9 88 aa4.26□□□□□ -1.73
SUDS3-202ENST00000541280 LOC102724200A0A096LPH7 203 aaPredicted RBP4.25□□□□□ -1.73
SUDS3-202ENST00000541280 TRAV2A0A0B4J234 112 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 KIR2DL5BA0A0G2JN68 375 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 KIR2DL5BA0A0G2JPC4 375 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 IGHV7-4-1A0A0J9YVY3 117 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 IZUMO1RA6ND01 250 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 CEBPZOSA8MTT3 80 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 FAM90A26D6RGX4 464 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 CLN5O75503 358 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 MED6O75586 246 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 DFFBO76075 338 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM50AO95807 157 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 FABP1P07148 127 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 RNASE2P10153 161 aaKnown RBP4.25□□□□□ -1.73
SUDS3-202ENST00000541280 AKR1C4P17516 323 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 NPPCP23582 126 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms