RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ATP5G3P48201 142 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 CLDN12P56749 244 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 FXYD7P58549 80 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 TWIST1Q15672 202 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM69Q5SWH9 247 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 SPATA31B1PQ5VZV4 182 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 C16orf54Q6UWD8 224 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 FOXI2Q6ZQN5 318 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 ZNF709Q8N972 641 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 OR4C16Q8NGL9 310 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 SECTM1Q8WVN6 248 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 PINX1Q96BK5 328 aaKnown RBP3.15□□□□□ -1.91
SNHG1-214ENST00000540865 TSC22D3Q99576 134 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 C9orf16Q9BUW7 83 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 RBM38Q9H0Z9 239 aaKnown RBP3.15□□□□□ -1.91
SNHG1-214ENST00000540865 SAV1Q9H4B6 383 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-214ENST00000540865 FNDC4Q9H6D8 234 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-214ENST00000540865 NRN1Q9NPD7 142 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 NSG2Q9Y328 171 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 MRPS16Q9Y3D3 137 aaKnown RBP3.15□□□□□ -1.91
SNHG1-214ENST00000540865 AK6Q9Y3D8 172 aaKnown RBP3.15□□□□□ -1.91
SNHG1-214ENST00000540865 A0A087WTM6 91 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 METTL21EPA6NDL7 271 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 GAGE12JA6NER3 117 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 CLN5O75503 358 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 ARL6IP5O75915 188 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 IGKV3-20P01619 116 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 F2RP25116 425 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 TSPOP30536 169 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 FCGR2CP31995 323 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 PPP5CP53041 499 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 HAMPP81172 84 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 ERHP84090 104 aaKnown RBP3.14□□□□□ -1.91
SNHG1-214ENST00000540865 PSG9Q00887 426 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 ESRGQ1W209 222 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 CDNFQ49AH0 187 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 AADACL3Q5VUY0 350 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 HACD4Q5VWC8 232 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 NFE4Q86UQ8 179 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 ZNF555Q8NEP9 628 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 OR13F1Q8NGS4 319 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 OR51H1Q8NH63 302 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 RXFP4Q8TDU9 374 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 PYDC1Q8WXC3 89 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 BORCS5Q969J3 196 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM230Q96A57 120 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM18Q96B42 140 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 UHRF2Q96PU4 802 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 SLC5A7Q9GZV3 580 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 SCPEP1Q9HB40 452 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 ANXA10Q9UJ72 324 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 ELF5Q9UKW6 265 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-214ENST00000540865 V9GY05 133 aa3.14□□□□□ -1.91
SNHG1-214ENST00000540865 TRAV30A0A087WSZ9 112 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 H3BNG1 76 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 CORTO00230 105 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 KRASP01116 189 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 PPYP01298 95 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 P0C879 139 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 DNAH10OSP0CZ25 163 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 M6PRP20645 277 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 G6PCP35575 357 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 RASSF2P50749 326 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 PAX9P55771 341 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 HSPE1P61604 102 aaKnown RBP3.13□□□□□ -1.91
SNHG1-214ENST00000540865 B2MP61769 119 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 PRCDQ00LT1 54 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 TRAM1Q15629 374 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 ZNF79Q15937 498 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 HES5Q5TA89 166 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 GDF5OSQ5U4N7 250 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 ZFP1Q6P2D0 407 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM91Q6ZNR0 172 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 ZNF818PQ6ZRF7 136 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 OR4B1Q8NGF8 309 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 OR4X1Q8NH49 305 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 LGALS14Q8TCE9 139 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 Q8WTZ3 238 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 FCAMRQ8WWV6 532 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 GNPNAT1Q96EK6 184 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-214ENST00000540865 IGF2BP2-AS1Q96M15 143 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 ABHD1Q96SE0 405 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM208Q9BTX3 173 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 MND1Q9BWT6 205 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 SLC35B3Q9H1N7 401 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 PSORS1C1Q9UIG5 152 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 DAPK2Q9UIK4 370 aa3.13□□□□□ -1.91
SNHG1-214ENST00000540865 MUC2Q02817 5179 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 TRAV26-1A0A087WT03 109 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 PLAC8L1A1L4L8 177 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 IFITM5A6NNB3 132 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 A8MTW9 85 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 ZNF705GA8MUZ8 300 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 INS-IGF2F8WCM5 200 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 EBAG9O00559 213 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 SIVA1O15304 175 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 ATP8B1O43520 1251 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 BUB3O43684 328 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 GSTZ1O43708 216 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 SSX5O60225 188 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms