RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 GZMBP10144 247 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 TFPI2P48307 235 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 EFNA4P52798 201 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 C22orf15Q8WYQ4 148 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 NBASA2RRP1 2371 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 PPP5D1E7EU14 171 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 NDUFS7O75251 213 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 MOSP00540 346 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 CRYBB3P26998 211 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 VMO1Q7Z5L0 202 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 SIRPDQ9H106 197 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 COL6A6A6NMZ7 2263 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 A0A1W2PPQ1 181 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 HOXB4P17483 251 aaPredicted RBP10.95□□□□□ -0.66
RTN3-210ENST00000540798 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 ACTL10Q5JWF8 245 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 FXYD5Q96DB9 178 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 HIST1H2BLQ99880 126 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 UBE2L3P68036 154 aaKnown RBP10.94□□□□□ -0.66
RTN3-210ENST00000540798 Q8N6K4 173 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 BTF3L4Q96K17 158 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 IGF2BP2-AS1Q96M15 143 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 UBTD1Q9HAC8 227 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 TMEM8BA6NDV4 472 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 M0R143 59 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 APELAP0DMC3 54 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 MYCNOSP40205 109 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 LGALS4P56470 323 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 EBI3Q14213 229 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 MMDQ15546 238 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 MINOS1Q5TGZ0 78 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 OR10G8Q8NGN5 311 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 PAXXQ9BUH6 204 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 MINOS1-NBL1R4GNA1 71 aa10.94□□□□□ -0.66
RTN3-210ENST00000540798 HELTA6NFD8 242 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 OVOL3O00110 214 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 RPL15P61313 204 aaKnown RBP10.93□□□□□ -0.66
RTN3-210ENST00000540798 LINC00305Q7Z4B0 112 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 IGLV2-8P01709 118 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 PYYP10082 97 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 CENPWQ5EE01 88 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 DYNAPQ8N1N2 210 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 PERPQ96FX8 193 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 CBY3A6NI87 242 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 IGLC1P0CG04 106 aa10.93□□□□□ -0.66
RTN3-210ENST00000540798 SUMO1P63165 101 aaKnown RBP10.93□□□□□ -0.66
RTN3-210ENST00000540798 LINC00614P0C842 121 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 GNG4P50150 75 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 PLGLAQ15195 96 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
RTN3-210ENST00000540798 CCDC144NLQ6NUI1 221 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 ZNF329Q86UD4 541 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 IGFBPL1Q8WX77 278 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 WNT10AQ9GZT5 417 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 CHD6Q8TD26 2715 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 IGHV2-70DA0A0C4DH43 119 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 C5orf64Q2M2E5 130 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 IL36BQ9NZH7 164 aa10.92□□□□□ -0.66
RTN3-210ENST00000540798 K7EIM0 57 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 GCGP01275 180 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 OR5I1Q13606 314 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 CLEC12BQ2HXU8 276 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 PITPNC1Q9UKF7 332 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 V9GYV3 84 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
RTN3-210ENST00000540798 LMO4P61968 165 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 AJUBAQ96IF1 538 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 CDC42EP3Q9UKI2 254 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 HYPMO75409 117 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
RTN3-210ENST00000540798 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
RTN3-210ENST00000540798 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 GP9P14770 177 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 PDLIM4P50479 330 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 FXYD3Q14802 87 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 Q5PR19 223 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 OR1B1Q8NGR6 318 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 TBL2Q9Y4P3 447 aaKnown RBP10.9□□□□□ -0.66
RTN3-210ENST00000540798 KMT2BQ9UMN6 2715 aaPredicted RBP10.9□□□□□ -0.66
RTN3-210ENST00000540798 CNIH1O95406 144 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 ORM2P19652 201 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 ASPHD1Q5U4P2 390 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 ZNF705AQ6ZN79 300 aaPredicted RBP10.9□□□□□ -0.66
RTN3-210ENST00000540798 S100A7AQ86SG5 101 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 LPAR2Q9HBW0 351 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
RTN3-210ENST00000540798 NPIPB5A8MRT5 1133 aa10.89□□□□□ -0.67
RTN3-210ENST00000540798 CD24P25063 80 aa10.89□□□□□ -0.67
RTN3-210ENST00000540798 ZNF562Q6V9R5 426 aa10.89□□□□□ -0.67
RTN3-210ENST00000540798 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
RTN3-210ENST00000540798 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
RTN3-210ENST00000540798 GSX1Q9H4S2 264 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms