RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	HELT	A6NFD8	242 aa		14.68	□□□□□ -0.06
RAP1B-222	ENST00000540781		K7EQG2	157 aa		14.68	□□□□□ -0.06
RAP1B-222	ENST00000540781	LEMD1	Q68G75	181 aa		14.68	□□□□□ -0.06
RAP1B-222	ENST00000540781	RNF183	Q96D59	192 aa		14.68	□□□□□ -0.06
RAP1B-222	ENST00000540781	CSTL1	Q9H114	145 aa		14.68	□□□□□ -0.06
RAP1B-222	ENST00000540781	IGKV1D-37	A0A075B6S9	117 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	MPTX1	A8MV57	137 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	LYRM1	O43325	122 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	FABP1	P07148	127 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	SPANXN5	Q5MJ07	72 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	GLMP	Q8WWB7	406 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	RNF125	Q96EQ8	232 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	PBDC1	Q9BVG4	233 aa		14.67	□□□□□ -0.06
RAP1B-222	ENST00000540781	AP2S1	P53680	142 aa	Predicted RBP	14.66	□□□□□ -0.06
RAP1B-222	ENST00000540781	ID3	Q02535	119 aa		14.66	□□□□□ -0.06
RAP1B-222	ENST00000540781	ZNF90	Q03938	601 aa		14.66	□□□□□ -0.06
RAP1B-222	ENST00000540781	STRAP	Q9Y3F4	350 aa	Known RBP	14.66	□□□□□ -0.06
RAP1B-222	ENST00000540781		H3BP45	60 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	BUB3	O43684	328 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	ZNF688	P0C7X2	276 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	NKX2-1	P43699	371 aa	Predicted RBP	14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	POLR2G	P62487	172 aa	Known RBP eCLIP	14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	OR4D5	Q8NGN0	318 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	DCANP1	Q8TF63	244 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	TRGV9	Q99603	122 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	C20orf85	Q9H1P6	137 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	PFDN2	Q9UHV9	154 aa		14.65	□□□□□ -0.06
RAP1B-222	ENST00000540781	NUP62	P37198	522 aa	Predicted RBP	14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781	OR2F1	Q13607	317 aa		14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781	OR8G2P	Q6IF36	304 aa		14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781	THAP8	Q8NA92	274 aa		14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781	MITD1	Q8WV92	249 aa		14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781	CCDC32	Q9BV29	185 aa		14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781	DYNC2H1	Q8NCM8	4307 aa	Known RBP	14.64	□□□□□ -0.07
RAP1B-222	ENST00000540781		A0A0J9YWU9	116 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	SNRPGP15	A8MWD9	76 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	PRSS46	E5RG02	174 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	TCRB	P04435	133 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	LYZ	P61626	148 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	IAH1	Q2TAA2	248 aa	Predicted RBP	14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	SIGLEC15	Q6ZMC9	328 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	LINC00299	Q6ZSB3	139 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	STH	Q8IWL8	128 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	PSENEN	Q9NZ42	101 aa		14.63	□□□□□ -0.07
RAP1B-222	ENST00000540781	TENM2	Q9NT68	2774 aa		14.62	□□□□□ -0.07
RAP1B-222	ENST00000540781	IGKV1OR2-108	A0A075B7D4	117 aa		14.62	□□□□□ -0.07
RAP1B-222	ENST00000540781	SSSCA1	O60232	199 aa		14.62	□□□□□ -0.07
RAP1B-222	ENST00000540781	RYR3	Q15413	4870 aa		14.62	□□□□□ -0.07
RAP1B-222	ENST00000540781	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	14.62	□□□□□ -0.07
RAP1B-222	ENST00000540781	TRAV6	A0A075B6T7	132 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	SCGB1D2	O95969	90 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	GATAD1	Q8WUU5	269 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	S100Z	Q8WXG8	99 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	SMIM8	Q96KF7	97 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	NRN1	Q9NPD7	142 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	GSKIP	Q9P0R6	139 aa		14.61	□□□□□ -0.07
RAP1B-222	ENST00000540781	KNCN	A6PVL3	124 aa		14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	CA1	P00915	261 aa	Predicted RBP	14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	AKR1C1	Q04828	323 aa		14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	PSMG4	Q5JS54	123 aa		14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	ACOT7L	Q6ZUV0	252 aa		14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	PPP1R14B	Q96C90	147 aa		14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	AGRN	O00468	2067 aa		14.6	□□□□□ -0.07
RAP1B-222	ENST00000540781	LCE6A	A0A183	80 aa		14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781		A6NHS1	94 aa		14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781	CFD	P00746	253 aa	Predicted RBP	14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781	ACTL10	Q5JWF8	245 aa		14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781	TRPT1	Q86TN4	253 aa	Known RBP	14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781	RARRES2	Q99969	163 aa		14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781	NUDT15	Q9NV35	164 aa		14.59	□□□□□ -0.07
RAP1B-222	ENST00000540781	SMCO3	A2RU48	225 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	PAX9	P55771	341 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	SNRPD3	P62318	126 aa	Known RBP	14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	EWSR1	Q01844	656 aa	Known RBP eCLIP	14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	C1orf194	Q5T5A4	169 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	ZNF431	Q8TF32	576 aa	Predicted RBP	14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	RAB40C	Q96S21	281 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	SEC22C	Q9BRL7	303 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	SEPSECS	Q9HD40	501 aa	Known RBP	14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	FBXL17	Q9UF56	701 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	STARD9	Q9P2P6	4700 aa		14.58	□□□□□ -0.08
RAP1B-222	ENST00000540781	FAM240B	A0A1B0GVZ2	78 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	CCS	O14618	274 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	H2AFB2	P0C5Z0	115 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	ZNF846	Q147U1	533 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	MZT2B	Q6NZ67	158 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	TMEM144	Q7Z5S9	345 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	TMEM217	Q8N7C4	229 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	BPIFC	Q8NFQ6	507 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	OR11H2	Q8NH07	326 aa		14.57	□□□□□ -0.08
RAP1B-222	ENST00000540781	PMS2P5	A8MQ11	134 aa		14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	CCNK	O75909	580 aa		14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	SPP1	P10451	314 aa		14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	GATA2	P23769	480 aa	Predicted RBP	14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	TAS2R30	P59541	319 aa		14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	MORN3	Q6PF18	240 aa	Predicted RBP	14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	TMEM14EP	Q6UXP3	125 aa		14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	OR8I2	Q8N0Y5	310 aa		14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	C12orf45	Q8N5I9	185 aa	Predicted RBP	14.56	□□□□□ -0.08
RAP1B-222	ENST00000540781	TBC1D24	Q9ULP9	559 aa		14.56	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms