RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 C2orf50Q96LR7 162 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 RHPN1-AS1Q9BWJ2 59 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 COMMD5Q9GZQ3 224 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 PLEKHA2Q9HB19 425 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 MBD2Q9UBB5 411 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 KCNIP3Q9Y2W7 256 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 IGHV3-21A0A0B4J1V1 117 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 TEX13DA0A0J9YY54 714 aaPredicted RBP5.29□□□□□ -1.56
YBX3-209ENST00000540747 TEX50A0A1B0GTY4 177 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 C15orf61A6NNL5 157 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 ZNF705EA8MWA4 302 aaPredicted RBP5.29□□□□□ -1.56
YBX3-209ENST00000540747 IGLL5B9A064 214 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 TNFSF12O43508 249 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 SCO1O75880 301 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 CA1P00915 261 aaPredicted RBP5.29□□□□□ -1.56
YBX3-209ENST00000540747 PPYP01298 95 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 AMBPP02760 352 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 PET100P0DJ07 73 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 OR13C7P0DN81 318 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 TPT1P13693 172 aaKnown RBP5.29□□□□□ -1.56
YBX3-209ENST00000540747 CMC4P56277 68 aaPredicted RBP5.29□□□□□ -1.56
YBX3-209ENST00000540747 PRSS54Q6PEW0 395 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 TMEM116Q8NCL8 245 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 OR1L8Q8NGR8 309 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 OR1S1Q8NH92 325 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 LINC00052Q96N35 136 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 C20orf24Q9BUV8 137 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 VSIRQ9H7M9 311 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 GSKIPQ9P0R6 139 aa5.29□□□□□ -1.56
YBX3-209ENST00000540747 AGRNO00468 2067 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 IGHV4-4A0A075B6R2 117 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 TRAV2A0A0B4J234 112 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 IGHV4-28A0A0C4DH34 117 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 RNF222A6NCQ9 220 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 DBX1A6NMT0 343 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 I3L2K1 104 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 TAAR5O14804 337 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 CYB5BO43169 146 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 DFFBO76075 338 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 HOXB5P09067 269 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 HLA-DMBP28068 263 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 FCGR2CP31995 323 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 BTN1A1Q13410 526 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 TMEM187Q14656 261 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 EIF5AL1Q6IS14 154 aaKnown RBP5.28□□□□□ -1.56
YBX3-209ENST00000540747 SLC25A24Q6NUK1 477 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 UQCC3Q6UW78 93 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 ZNF818PQ6ZRF7 136 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 Q6ZTC4 211 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 LHFPL1Q86WI0 220 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 BAP18Q8IXM2 172 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 LILRB2Q8N423 598 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 FAM24BQ8N5W8 94 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 OR1P1Q8NH06 330 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 SECTM1Q8WVN6 248 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 LSM10Q969L4 123 aaKnown RBP5.28□□□□□ -1.56
YBX3-209ENST00000540747 TMEM230Q96A57 120 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 MRGPRFQ96AM1 343 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 ZNF2Q9BSG1 426 aaPredicted RBP5.28□□□□□ -1.56
YBX3-209ENST00000540747 RTBDNQ9BSG5 229 aaPredicted RBP5.28□□□□□ -1.56
YBX3-209ENST00000540747 RNF126Q9BV68 326 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 X6R8D5 127 aa5.28□□□□□ -1.56
YBX3-209ENST00000540747 ELOA3CA0A087WX78 387 aaPredicted RBP5.27□□□□□ -1.57
YBX3-209ENST00000540747 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 TRAV10A0A0B4J240 114 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 RAB19A4D1S5 217 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 MARCH11A6NNE9 402 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 NUPL2O15504 423 aaKnown RBP5.27□□□□□ -1.57
YBX3-209ENST00000540747 ADAP1O75689 374 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 APOC3P02656 99 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 MIFP14174 115 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 PI3P19957 117 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 GNRHRP30968 328 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 TFPI2P48307 235 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 S100A10P60903 97 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 RELQ04864 619 aaPredicted RBP5.27□□□□□ -1.57
YBX3-209ENST00000540747 CATR1Q13166 79 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 FAM74A1Q5RGS3 127 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 Q6ZR54 194 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
YBX3-209ENST00000540747 ZNF114Q8NC26 417 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 CSNK1G2-AS1Q8NCQ2 148 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 OR51H1Q8NH63 302 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 RNF141Q8WVD5 230 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 TXN2Q99757 166 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 SLC5A7Q9GZV3 580 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 MS4A6AQ9H2W1 248 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 ZFAND3Q9H8U3 227 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 TMEM14BQ9NUH8 114 aa5.27□□□□□ -1.57
YBX3-209ENST00000540747 IGHV3OR16-13A0A075B7E8 117 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 IGHV3-74A0A0B4J1X5 117 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 LOC105371267A0A1B0GV96 52 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 PRSS29PA6NIE9 313 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 H0YIZ8 118 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 APOHP02749 345 aaPredicted RBP5.26□□□□□ -1.57
YBX3-209ENST00000540747 CD5P06127 495 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 F2RP25116 425 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 DEFB131AP59861 70 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 HERV-K104P61576 105 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms