RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 OR4F17Q8NGA8 305 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 OR4F4Q96R69 305 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 SMIM3Q9BZL3 60 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 ARL6Q9H0F7 186 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 PAIP2BQ9ULR5 123 aaKnown RBP8.07□□□□□ -1.12
VPS33A-204ENST00000540669 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 LGALS9O00182 355 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 NDUFA4O00483 81 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 GGCTO75223 188 aaKnown RBP8.06□□□□□ -1.12
VPS33A-204ENST00000540669 JTBO76095 146 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 YIF1AO95070 293 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 FGF7P21781 194 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 HOXD3P31249 432 aaPredicted RBP8.06□□□□□ -1.12
VPS33A-204ENST00000540669 ARL3P36405 182 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 ZNF616Q08AN1 781 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 KLF5Q13887 457 aaPredicted RBP8.06□□□□□ -1.12
VPS33A-204ENST00000540669 Q56UQ5 140 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 UNQ9165/PRO28630Q6UXU0 137 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 CYP2G1PQ6ZSU1 146 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 STPG3Q8N7X2 389 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 U3KQE9 123 aa8.06□□□□□ -1.12
VPS33A-204ENST00000540669 MGAM2Q2M2H8 2515 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 TMEM213A2RRL7 107 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 LINC01619G3V211 115 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 NUPL2O15504 423 aaKnown RBP8.05□□□□□ -1.12
VPS33A-204ENST00000540669 CFDP00746 253 aaPredicted RBP8.05□□□□□ -1.12
VPS33A-204ENST00000540669 SPP1P10451 314 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 PSG1P11464 419 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 ATP6V0CP27449 155 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 CAMLGP49069 296 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 AP2S1P53680 142 aaPredicted RBP8.05□□□□□ -1.12
VPS33A-204ENST00000540669 USF2Q15853 346 aaPredicted RBP8.05□□□□□ -1.12
VPS33A-204ENST00000540669 PRR31Q5SQ13 230 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 TOMM20LQ6UXN7 152 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 SLC51BQ86UW2 128 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 LINC00482Q8N8I6 264 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 RCC1LQ96I51 464 aaKnown RBP8.05□□□□□ -1.12
VPS33A-204ENST00000540669 OR5B12Q96R08 314 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 RSG1Q9BU20 258 aa8.05□□□□□ -1.12
VPS33A-204ENST00000540669 KANTRA0A1W2PQU2 76 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 SMCO3A2RU48 225 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 ZFP92A6NM28 416 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 CCL24O00175 119 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 PF4P02776 101 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 C8orf88P0DMB2 117 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 ZP3P21754 424 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 MYCNOSP40205 109 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 ELLP55199 621 aaPredicted RBP8.04□□□□□ -1.12
VPS33A-204ENST00000540669 RELQ04864 619 aaPredicted RBP8.04□□□□□ -1.12
VPS33A-204ENST00000540669 NSUN5P1Q3KNT7 163 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 PXDC1Q5TGL8 231 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 PATE2Q6UY27 113 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 IL34Q6ZMJ4 242 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 C1QL4Q86Z23 238 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 OR51G1Q8NGK1 321 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 OR1N2Q8NGR9 330 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 RNF125Q96EQ8 232 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 SH3BGRL3Q9H299 93 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 KCNIP2Q9NS61 270 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 TECRQ9NZ01 308 aaKnown RBP8.04□□□□□ -1.12
VPS33A-204ENST00000540669 MRPL27Q9P0M9 148 aaKnown RBP8.04□□□□□ -1.12
VPS33A-204ENST00000540669 RFNGQ9Y644 331 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 PXMP4Q9Y6I8 212 aa8.04□□□□□ -1.12
VPS33A-204ENST00000540669 BORCS7-ASMTA0A0B4J1R7 106 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 ANKRD34BA5PLL1 514 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 NUDT19A8MXV4 375 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 K7EMT4 169 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 WIPF1O43516 503 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 SCGB2A1O75556 95 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 IFNA5P01569 189 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 FABP1P07148 127 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 HNRNPCP07910 306 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS33A-204ENST00000540669 SEC11BP0C7V7 166 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 TPT1P13693 172 aaKnown RBP8.03□□□□□ -1.12
VPS33A-204ENST00000540669 GATA2P23769 480 aaPredicted RBP8.03□□□□□ -1.12
VPS33A-204ENST00000540669 CRYBB3P26998 211 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 SERF2P84101 59 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 ADAMTSL5Q6ZMM2 481 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 BAP18Q8IXM2 172 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 ST8SIA2Q92186 375 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 GNPNAT1Q96EK6 184 aaPredicted RBP8.03□□□□□ -1.12
VPS33A-204ENST00000540669 ZC4H2Q9NQZ6 224 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 SLC39A9Q9NUM3 307 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 SIGLEC8Q9NYZ4 499 aa8.03□□□□□ -1.12
VPS33A-204ENST00000540669 PUS1Q9Y606 427 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS33A-204ENST00000540669 SEC14L6B5MCN3 397 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 H3BRN7 92 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 TSPAN15O95858 294 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 OR5G3P0C626 314 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 RD3LP0DJH9 198 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 SLURP1P55000 103 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 B2MP61769 119 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 HSD17B11Q8NBQ5 300 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 BPIFCQ8NFQ6 507 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 TMEM37Q8WXS4 190 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 DLX4Q92988 240 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms