RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 TMPRSS5Q9H3S3 457 aa6.55□□□□□ -1.36
C2CD3-215ENST00000540452 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
C2CD3-215ENST00000540452 HIF1ANQ9NWT6 349 aa6.55□□□□□ -1.36
C2CD3-215ENST00000540452 MRPL27Q9P0M9 148 aaKnown RBP6.55□□□□□ -1.36
C2CD3-215ENST00000540452 HIGD1AQ9Y241 93 aa6.55□□□□□ -1.36
C2CD3-215ENST00000540452 FBN3Q75N90 2809 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 PRRC2AP48634 2157 aaKnown RBP6.54□□□□□ -1.36
C2CD3-215ENST00000540452 TRBV24-1A0A075B6N3 115 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 TRAV9-1A0A075B6T8 112 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 WI2-2373I1.2A0A1W2PRP0 233 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 COLCA2A8K830 154 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 FSHBP01225 129 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 RD3LP0DJH9 198 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 EGR2P11161 476 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-215ENST00000540452 TAS2R60P59551 318 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 FLI1Q01543 452 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-215ENST00000540452 PRB3Q04118 309 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-215ENST00000540452 PDE6HQ13956 83 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 CST9LP1Q5W188 147 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 ZNF343Q6P1L6 599 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 PATE2Q6UY27 113 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 MIR17HGQ75NE6 70 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 CBLN2Q8IUK8 224 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 NECAP1Q8NC96 275 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 OR5AU1Q8NGC0 362 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 OR5R1Q8NH85 324 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 C17orf50Q8WW18 174 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 ZNF503Q96F45 646 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 PAXXQ9BUH6 204 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 SLC25A2Q9BXI2 301 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 ZNF355PQ9NSJ1 428 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 C21orf62Q9NYP8 219 aa6.54□□□□□ -1.36
C2CD3-215ENST00000540452 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 TMEM89A2RUT3 159 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 A6NDX4 124 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 GNG7O60262 68 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 IGHG2P01859 326 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 PSG1P11464 419 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 ATP5G3P48201 142 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 MEOX2P50222 304 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
C2CD3-215ENST00000540452 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
C2CD3-215ENST00000540452 NDPQ00604 133 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 ZNF90Q03938 601 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 SPATA31B1PQ5VZV4 182 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 TMEM88Q6PEY1 159 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 BPIFA4PQ86YQ2 179 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 PIFOQ8TCI5 191 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 Q8WTZ3 238 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 GPR82Q96P67 336 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 PRDM13Q9H4Q3 707 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 MRPL36Q9P0J6 103 aaKnown RBP6.53□□□□□ -1.36
C2CD3-215ENST00000540452 CDC42EP3Q9UKI2 254 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 YTHDF2Q9Y5A9 579 aaKnown RBP6.53□□□□□ -1.36
C2CD3-215ENST00000540452 CENPEQ02224 2701 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 ITPR2Q14571 2701 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 AKAP6Q13023 2319 aa6.53□□□□□ -1.36
C2CD3-215ENST00000540452 SERTM2A0A1B0GWG4 89 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 FBLL1A6NHQ2 334 aaKnown RBP6.52□□□□□ -1.37
C2CD3-215ENST00000540452 H3BRN7 92 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 ZNF253O75346 499 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 NDUFB4O95168 129 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 OR10J4P0C629 311 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 HIST1H1EP10412 219 aaKnown RBP6.52□□□□□ -1.37
C2CD3-215ENST00000540452 GP9P14770 177 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 GATA2P23769 480 aaPredicted RBP6.52□□□□□ -1.37
C2CD3-215ENST00000540452 S100PP25815 95 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 SRP14P37108 136 aaKnown RBP6.52□□□□□ -1.37
C2CD3-215ENST00000540452 MYCNOSP40205 109 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 CEBPGP53567 150 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 UNQ5815/PRO19632Q6UWF5 114 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 ZNF491Q8N8L2 437 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 C2CD4CQ8TF44 421 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 FXYD5Q96DB9 178 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 RNF125Q96EQ8 232 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 USMG5Q96IX5 58 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 PYGO2Q9BRQ0 406 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 TMUB1Q9BVT8 246 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 SLC25A39Q9BZJ4 359 aaPredicted RBP6.52□□□□□ -1.37
C2CD3-215ENST00000540452 BIN3Q9NQY0 253 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 F8P00451 2351 aa6.52□□□□□ -1.37
C2CD3-215ENST00000540452 TRBV6-1A0A0K0K1D8 114 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 A0A0U1RQK1 487 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 HELTA6NFD8 242 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 GGTLC3B5MD39 225 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
C2CD3-215ENST00000540452 H7BYZ3 331 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 BMPR1BO00238 502 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 ATP6V0E1O15342 81 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 NUPL2O15504 423 aaKnown RBP6.51□□□□□ -1.37
C2CD3-215ENST00000540452 NBEAP1P0C6P0 100 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 ORM2P19652 201 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 RAB5AP20339 215 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 NPPCP23582 126 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 CD24P25063 80 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 UBE2G2P60604 165 aa6.51□□□□□ -1.37
C2CD3-215ENST00000540452 RAB5BP61020 215 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms