RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PIEZO2Q9H5I5 2752 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 K7EM74 188 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 ARL3P36405 182 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 TAS2R45P59539 299 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 ADIPOQQ15848 244 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 SYT8Q8NBV8 401 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 OR10X1Q8NGY0 326 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 HARBI1Q96MB7 349 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 TM2D2Q9BX73 214 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 TPRP12270 2363 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 A0A1W2PNR3 127 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 K7ERJ3 54 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 ID1P41134 155 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 KIR2DL2P43627 348 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 TRAT1Q6PIZ9 186 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM214BQ7L5A3 538 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 DRAM1Q8N682 238 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 NABP1Q96AH0 204 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 SNRNP40Q96DI7 357 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 C1QTNF4Q9BXJ3 329 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 DUSP13Q9UII6 198 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 KLF13Q9Y2Y9 288 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 DSPP15924 2871 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 HIGD1CA8MV81 97 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 H3BMG7 143 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 NTF4P34130 210 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 CFHR2P36980 270 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 GPR12P47775 334 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 MEOX1P50221 254 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 FXYD2P54710 66 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 XGP55808 180 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF816Q0VGE8 651 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 KLRD1Q13241 179 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 Q6ZUT4 128 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 TTTY12Q9BZ98 90 aa7.72□□□□□ -1.17
CTNNA1-243ENST00000540387 hADV38S2A0JD32 116 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 CRYGSP22914 178 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 MAGEA5P43359 124 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 FGF12P61328 243 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 PLGLB1Q02325 96 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 PSG5Q15238 335 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 OSR1Q8TAX0 266 aaPredicted RBP7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 PHLDA1Q8WV24 401 aaPredicted RBP7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 OXGR1Q96P68 337 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 GCM1Q9NP62 436 aa7.71□□□□□ -1.17
CTNNA1-243ENST00000540387 DHHO43323 396 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 GCSHP23434 173 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 B3GALT5-AS1P59052 145 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 ATP5L2Q7Z4Y8 100 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 TMEM178AQ8NBL3 297 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 SRSF8Q9BRL6 282 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF747Q9BV97 191 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 TMUB1Q9BVT8 246 aa7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 F11RQ9Y624 299 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-243ENST00000540387 USF3Q68DE3 2245 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 SPENQ96T58 3664 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 TEX50A0A1B0GTY4 177 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 GGTLC3B5MD39 225 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 E9PLD3 99 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 CT45A6P0DMU7 189 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 CT45A5P0DMU8 189 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 CT45A7P0DMV0 189 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 CT45A1Q5HYN5 189 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 MIR17HGQ75NE6 70 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 ZADH2Q8N4Q0 377 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 CT45A3Q8NHU0 189 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 UBALD1Q8TB05 177 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF502Q8TBZ5 544 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 PLPPR2Q96GM1 343 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 YAE1D1Q9NRH1 226 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 PRO0461Q9UI25 63 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 CACNA1DQ01668 2161 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 TRAV17A0A0B4J275 112 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 hCG_38984A0A1B0GV85 526 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 NPIPB11E5RHQ5 1161 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 TMPRSS3P57727 454 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 HBBP68871 147 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 FHL3Q13643 280 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 IGFL3Q6UXB1 125 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 FAM231DQ6ZW35 169 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 PCP2Q8IVA1 136 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 BCL6BQ8N143 479 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 RAX2Q96IS3 184 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 TMEM140Q9NV12 185 aa7.7□□□□□ -1.18
CTNNA1-243ENST00000540387 TRBV6-6A0A0A6YYG2 114 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 A4D1N5 150 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 C5orf49A4QMS7 147 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 A8MWL6 223 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 ACTL6BO94805 426 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 APOMO95445 188 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 CATR1Q13166 79 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 ZNF146Q15072 292 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 C1orf159Q96HA4 380 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 DEFB127Q9H1M4 99 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 TMEM167BQ9NRX6 74 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 DNAJC13O75165 2243 aa7.69□□□□□ -1.18
CTNNA1-243ENST00000540387 MGST3O14880 152 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms