RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TMEM8BA6NDV4 472 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 K7ESF4 209 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 FOLR3P41439 243 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 BADQ92934 168 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 NABP1Q96AH0 204 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
PBX1-212ENST00000540236 TRAV2A0A0B4J234 112 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 DPM2O94777 84 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 SUMO3P55854 103 aaPredicted RBP9.09□□□□□ -0.95
PBX1-212ENST00000540236 FOXE3Q13461 319 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 ZNF329Q86UD4 541 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 HIGD1AQ9Y241 93 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 FNDC10F2Z333 226 aa9.09□□□□□ -0.96
PBX1-212ENST00000540236 PRSS2P07478 247 aa9.09□□□□□ -0.96
PBX1-212ENST00000540236 SMIM17P0DL12 118 aa9.09□□□□□ -0.96
PBX1-212ENST00000540236 FAM27BQ5VT28 67 aa9.09□□□□□ -0.96
PBX1-212ENST00000540236 SLC22A18ASQ8N1D0 253 aa9.09□□□□□ -0.96
PBX1-212ENST00000540236 RPUSD1Q9UJJ7 312 aaKnown RBP9.09□□□□□ -0.96
PBX1-212ENST00000540236 DLX1P56177 255 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 OBSL1O75147 1896 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 A0A1W2PQM1 296 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 IGLL5B9A064 214 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 FLVCR1-AS1Q8TAF5 88 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 TMEM54Q969K7 222 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 TIMD4Q96H15 378 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 PLXNA2O75051 1894 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 TCRAP04437 139 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 IGFBP4P22692 258 aa9.08□□□□□ -0.96
PBX1-212ENST00000540236 COLQQ9Y215 455 aaPredicted RBP9.08□□□□□ -0.96
PBX1-212ENST00000540236 DTX1Q86Y01 620 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 KMT2EQ8IZD2 1858 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 SAA2-SAA4A0A096LPE2 208 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 C2orf70A6NJV1 201 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 SPINK14Q6IE38 97 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 PPP1R27Q86WC6 154 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.07□□□□□ -0.96
PBX1-212ENST00000540236 BRWD3Q6RI45 1802 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 ORMDL3Q8N138 153 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 YPEL5P62699 121 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 FOXI1Q12951 378 aa9.07□□□□□ -0.96
PBX1-212ENST00000540236 Q6ZUT4 128 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 UBALD2Q8IYN6 164 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 GPR82Q96P67 336 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 TCF15Q12870 199 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 M0R1B8 84 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 LYZL1Q6UWQ5 148 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 VCX2Q9H322 139 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 C11orf1Q9H5F2 150 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
PBX1-212ENST00000540236 RNASE1P07998 156 aaKnown RBP9.06□□□□□ -0.96
PBX1-212ENST00000540236 AREGP15514 252 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 MFAP4P55083 255 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 FAM201AQ5SY85 155 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 LHX8Q68G74 356 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 CNTRLQ7Z7A1 2325 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
PBX1-212ENST00000540236 MDP1Q86V88 176 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 FBXL15Q9H469 300 aa9.06□□□□□ -0.96
PBX1-212ENST00000540236 DIDO1Q9BTC0 2240 aaKnown RBP9.05□□□□□ -0.96
PBX1-212ENST00000540236 S100A4P26447 101 aaKnown RBP9.05□□□□□ -0.96
PBX1-212ENST00000540236 SRSF2Q01130 221 aaKnown RBP9.05□□□□□ -0.96
PBX1-212ENST00000540236 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 SPANXN1Q5VSR9 72 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 SLC25A2Q9BXI2 301 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 IGKV3-7A0A075B6H7 116 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 FOXI3A8MTJ6 420 aaPredicted RBP9.05□□□□□ -0.96
PBX1-212ENST00000540236 J3QT63 122 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 FOXI2Q6ZQN5 318 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 C8orf49Q96NF6 230 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 SP9P0CG40 484 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 VWA8A3KMH1 1905 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 KIR2DS2P43631 304 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 RPS19BP1Q86WX3 136 aaKnown RBP9.05□□□□□ -0.96
PBX1-212ENST00000540236 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 APOBEC3AP31941 199 aaPredicted RBP9.05□□□□□ -0.96
PBX1-212ENST00000540236 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
PBX1-212ENST00000540236 DLL1O00548 723 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 CCL5P13501 91 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
PBX1-212ENST00000540236 TMEM158Q8WZ71 300 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 PROK2Q9HC23 129 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 TRAV26-2A0A0B4J265 109 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 FCN3O75636 299 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 MOGAT3Q86VF5 341 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 RASL11BQ9BPW5 248 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 RAB9BQ9NP90 201 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 PROCRQ9UNN8 238 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 LOXL1Q08397 574 aaPredicted RBP9.04□□□□□ -0.96
PBX1-212ENST00000540236 PRNDQ9UKY0 176 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 PCDH15Q96QU1 1955 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 MAGEA5P43359 124 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms