RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 J3QT63 122 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 KRASP01116 189 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 IGHG2P01859 326 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 ELANEP08246 267 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 IGKV1-13P0DP09 117 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
CPSF7-219ENST00000539952 ERVK11-1P61568 191 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 GAGE1Q13065 139 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 VWC2Q2TAL6 325 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 SPANXN5Q5MJ07 72 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 TRAT1Q6PIZ9 186 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 C18orf65Q6ZTR6 163 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 ZNF664Q8N3J9 261 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 DRAM1Q8N682 238 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 OR51H1Q8NH63 302 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 IL17DQ8TAD2 202 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 HES4Q9HCC6 221 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 FKBP11Q9NYL4 201 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 MTCH1Q9NZJ7 389 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 HSPB7Q9UBY9 170 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 CACNG5Q9UF02 275 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 GAB2Q9UQC2 676 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 MOB4Q9Y3A3 225 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 CBY1Q9Y3M2 126 aa4.66□□□□□ -1.66
CPSF7-219ENST00000539952 A0A1W2PPV4 95 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 SH2D7A6NKC9 451 aaPredicted RBP4.65□□□□□ -1.67
CPSF7-219ENST00000539952 BUB1B-PAK6H3BSN5 160 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 IGLV1-47P01700 117 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 ESDP10768 282 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 TPPP2P59282 170 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 PAX5Q02548 391 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 TNFRSF9Q07011 255 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM267Q0VDI3 215 aaPredicted RBP4.65□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF726P1Q15940 193 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 PDZD11Q5EBL8 140 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 GFI1BQ5VTD9 330 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 GBGT1Q8N5D6 347 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 RPP25LQ8N5L8 163 aaKnown RBP4.65□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF645Q8N7E2 425 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 CORO2AQ92828 525 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF488Q96MN9 340 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 RSG1Q9BU20 258 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 PARLQ9H300 379 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 PRO1933Q9H354 126 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 GAL3ST2Q9H3Q3 398 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 RBKSQ9H477 322 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 RAB9BQ9NP90 201 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 MBNL3Q9NUK0 354 aaKnown RBP4.65□□□□□ -1.67
CPSF7-219ENST00000539952 TRAPPC2LQ9UL33 140 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 PXMP4Q9Y6I8 212 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 ARL2-SNX15V9GYD0 113 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 STAB2Q8WWQ8 2551 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 RYR2Q92736 4967 aa4.65□□□□□ -1.67
CPSF7-219ENST00000539952 SACSQ9NZJ4 4579 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 TRGV10A0A0A0MS01 117 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 IGKV1-6A0A0C4DH72 117 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 A0A1W2PPQ1 181 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF320A2RRD8 509 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 C11orf94C9JXX5 98 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 LY6LH3BQJ8 138 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 SLC33A1O00400 549 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-219ENST00000539952 MGST3O14880 152 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 MMP23AO75900 390 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 SCGB1D1O95968 90 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 CXorf1O96002 111 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 IGKV1-5P01602 117 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 MT-ND6P03923 174 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 REG1AP05451 166 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 FRMD6-AS1P0C7T7 363 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 LINC00614P0C842 121 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 RD3LP0DJH9 198 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 IAPPP10997 89 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 CDC34P49427 236 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-219ENST00000539952 FGF8P55075 233 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-219ENST00000539952 ATP5IP56385 69 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-219ENST00000539952 SELENOTP62341 195 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 FOXE3Q13461 319 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF146Q15072 292 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 RTL8BQ17RB0 113 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 HLA-DRB5Q30154 266 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF585BQ52M93 769 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 FFAR4Q5NUL3 377 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 TPTE2P1Q5T6R2 138 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 Q6P435 159 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 WDR73Q6P4I2 378 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 ADAMTSL5Q6ZMM2 481 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF497Q6ZNH5 498 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 Q6ZRM9 215 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 RNF152Q8N8N0 203 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 OR11H1Q8NG94 326 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 OR52E5Q8NH55 327 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM37Q8WXS4 190 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 RPEQ96AT9 228 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 GALMQ96C23 342 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 RPUSD4Q96CM3 377 aaKnown RBP4.64□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM68Q96MH6 324 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 DUX3Q96PT4 197 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 UHRF2Q96PU4 802 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 C20orf144Q9BQM9 153 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms