RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 GGTLC1Q9BX51 225 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 PUS1Q9Y606 427 aaKnown RBP eCLIP11.09□□□□□ -0.63
USB1-203ENST00000539737 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
USB1-203ENST00000539737 H3BP45 60 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 IGKV1-17P01599 117 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 IGLC1P0CG04 106 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 TAS2R30P59541 319 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 DEFB135Q30KP9 77 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 C2orf50Q96LR7 162 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
USB1-203ENST00000539737 PSENENQ9NZ42 101 aa11.08□□□□□ -0.64
USB1-203ENST00000539737 RCL1Q9Y2P8 373 aaKnown RBP11.08□□□□□ -0.64
USB1-203ENST00000539737 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 TSC22D2O75157 780 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
USB1-203ENST00000539737 TIGITQ495A1 244 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
USB1-203ENST00000539737 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 NPIPB3Q92617 1050 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
USB1-203ENST00000539737 IGHV7-4-1A0A0J9YVY3 117 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 OR4C46A6NHA9 309 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 L7N2F9 121 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 ZNF207O43670 478 aaKnown RBP11.06□□□□□ -0.64
USB1-203ENST00000539737 MBPP02686 304 aaPredicted RBP11.06□□□□□ -0.64
USB1-203ENST00000539737 FABP1P07148 127 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 VAMP2P63027 116 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 PRR20EP86478 221 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 PRR20CP86479 221 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 PRR20DP86480 221 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 PRR20BP86481 221 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 PRR20AP86496 221 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 GAMTQ14353 236 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 Q8WTZ3 238 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
USB1-203ENST00000539737 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 ZFP92A6NM28 416 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 GOSR2O14653 212 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 TSPAN4O14817 238 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 TOMM40O96008 361 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
USB1-203ENST00000539737 APOC4P55056 127 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 NARS2Q96I59 477 aaKnown RBP11.05□□□□□ -0.64
USB1-203ENST00000539737 METTL26Q96S19 204 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 TMEM231Q9H6L2 316 aa11.05□□□□□ -0.64
USB1-203ENST00000539737 LSM5Q9Y4Y9 91 aaKnown RBP11.05□□□□□ -0.64
USB1-203ENST00000539737 K7EPK0 472 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 SSNA1O43805 119 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 CD5P06127 495 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 RD3LP0DJH9 198 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 RPL35AP18077 110 aaKnown RBP11.04□□□□□ -0.64
USB1-203ENST00000539737 CMC4P56277 68 aaPredicted RBP11.04□□□□□ -0.64
USB1-203ENST00000539737 S100A10P60903 97 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 ACOT7LQ6ZUV0 252 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
USB1-203ENST00000539737 A0A1W2PS18 150 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 C7orf66A4D0T2 115 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 NUPR2A6NF83 97 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 CHEK1O14757 476 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 NPPCP23582 126 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 PAX9P55771 341 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 AKR1C1Q04828 323 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 OR8G2PQ6IF36 304 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 OR10P1Q8NGE3 313 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
USB1-203ENST00000539737 ABCA13Q86UQ4 5058 aa11.03□□□□□ -0.64
USB1-203ENST00000539737 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 SPRY2O43597 315 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 IL4P05112 153 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 METTL15P1P0C7V9 234 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
USB1-203ENST00000539737 DLK1P80370 383 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 CYCSP99999 105 aaKnown RBP11.02□□□□□ -0.65
USB1-203ENST00000539737 ZNF124Q15973 351 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 OR51G1Q8NGK1 321 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 GRAMD2BQ96HH9 432 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 RNF2Q99496 336 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 TRGV9Q99603 122 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 NMES1Q9C002 83 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 VSIRQ9H7M9 311 aa11.02□□□□□ -0.65
USB1-203ENST00000539737 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 SMCO3A2RU48 225 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 PMS2P5A8MQ11 134 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 UBE2CO00762 179 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 HNRNPCP07910 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
USB1-203ENST00000539737 PSG1P11464 419 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 CRYBB3P26998 211 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 BCAP31P51572 246 aa11.01□□□□□ -0.65
USB1-203ENST00000539737 CAV2P51636 162 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms