RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 FAM3BP58499 235 aaPredicted RBP8.05□□□□□ -1.12
SPARC-209ENST00000539687 KIAA0141Q14154 515 aaPredicted RBP8.05□□□□□ -1.12
SPARC-209ENST00000539687 OR10G8Q8NGN5 311 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 SGMS2Q8NHU3 365 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 ZNF503Q96F45 646 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 SFRP2Q96HF1 295 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 PSMG3-AS1Q96PY0 264 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 CHRDL1Q9BU40 450 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 MEGF9Q9H1U4 602 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 SRD5A3Q9H8P0 318 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 MRPL36Q9P0J6 103 aaKnown RBP8.05□□□□□ -1.12
SPARC-209ENST00000539687 MOB4Q9Y3A3 225 aa8.05□□□□□ -1.12
SPARC-209ENST00000539687 ROS1P08922 2347 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 IGHV7-81A0A0B4J1V7 117 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 GGCTO75223 188 aaKnown RBP8.04□□□□□ -1.12
SPARC-209ENST00000539687 PFN1P07737 140 aaKnown RBP8.04□□□□□ -1.12
SPARC-209ENST00000539687 OR10J4P0C629 311 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 PSG1P11464 419 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 RPL35P42766 123 aaKnown RBP8.04□□□□□ -1.12
SPARC-209ENST00000539687 FOXL1Q12952 345 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 PATE2Q6UY27 113 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 DYNAPQ8N1N2 210 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 PITPNC1Q9UKF7 332 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 CDC42EP3Q9UKI2 254 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 URGCP-MRPS24S4R325 110 aa8.04□□□□□ -1.12
SPARC-209ENST00000539687 MYO9AB2RTY4 2548 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 TGIF2-C20orf24A0A0A6YYL0 155 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 GGTLC3B5MD39 225 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 TYMSP04818 313 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 APELAP0DMC3 54 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 HIST1H1EP10412 219 aaKnown RBP8.03□□□□□ -1.12
SPARC-209ENST00000539687 CRYBB3P26998 211 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 RAB9AP51151 201 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 LYZP61626 148 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 SUMO1P63165 101 aaKnown RBP8.03□□□□□ -1.12
SPARC-209ENST00000539687 COX19Q49B96 90 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 Q56UQ5 140 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 TEX38Q6PEX7 206 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 BPIFA4PQ86YQ2 179 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 LRRC75A-AS1Q8N1F1 130 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 LYPD1Q8N2G4 141 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 OR4F17Q8NGA8 305 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 C2CD4CQ8TF44 421 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 SAV1Q9H4B6 383 aaPredicted RBP8.03□□□□□ -1.12
SPARC-209ENST00000539687 BEX4Q9NWD9 120 aaPredicted RBP8.03□□□□□ -1.12
SPARC-209ENST00000539687 MRPL27Q9P0M9 148 aaKnown RBP8.03□□□□□ -1.12
SPARC-209ENST00000539687 DMRT1Q9Y5R6 373 aa8.03□□□□□ -1.12
SPARC-209ENST00000539687 TEP1Q99973 2627 aaKnown RBP8.03□□□□□ -1.12
SPARC-209ENST00000539687 IGHV4-30-2A0A087WSY4 118 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 TRAV40A0A0B4J280 105 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 AP4M1O00189 453 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 PEX7O00628 323 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 ISLRO14498 428 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 IGHV3-48P01763 117 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 S100A8P05109 93 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 CXCL1P09341 107 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 NBEAP1P0C6P0 100 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 CD24P25063 80 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 CRIP2P52943 208 aaPredicted RBP8.02□□□□□ -1.13
SPARC-209ENST00000539687 CLEC12BQ2HXU8 276 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 CENPWQ5EE01 88 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 ASPHD1Q5U4P2 390 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 ZNF343Q6P1L6 599 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 UNQ5815/PRO19632Q6UWF5 114 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 ZNF329Q86UD4 541 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 ARL6IP6Q8N6S5 226 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 C5orf56Q8N8D9 126 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 RNF125Q96EQ8 232 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 AJUBAQ96IF1 538 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 SHANK2-AS3Q9BTD1 123 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 FAM103A1Q9BTL3 118 aaKnown RBP8.02□□□□□ -1.13
SPARC-209ENST00000539687 SLC25A39Q9BZJ4 359 aaPredicted RBP8.02□□□□□ -1.13
SPARC-209ENST00000539687 OTORQ9NRC9 128 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 OSTCQ9NRP0 149 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 FLNCQ14315 2725 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 HIVEP3Q5T1R4 2406 aa8.02□□□□□ -1.13
SPARC-209ENST00000539687 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
SPARC-209ENST00000539687 TRAV5A0A0B4J249 113 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 SERTM2A0A1B0GWG4 89 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 WI2-2373I1.2A0A1W2PRP0 233 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 H3BRN7 92 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 H3BUA1 57 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 K7EQM0 130 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 UBE2CO00762 179 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 NDUFB8O95169 186 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 BRI3O95415 125 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 GCGP01275 180 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 GP9P14770 177 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 ERVFC1-1P60608 527 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 UBE2G1P62253 170 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 PDE6HQ13956 83 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 TMEM183BQ1AE95 376 aa8.01□□□□□ -1.13
SPARC-209ENST00000539687 ZFP82Q8N141 532 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms