RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SULT1A2P50226 295 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 KLF5Q13887 457 aaPredicted RBP9.93□□□□□ -0.82
CCDC42-202ENST00000539522 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 ADAMTSL5Q6ZMM2 481 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 SLC16A13Q7RTY0 426 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 EEF1AKMT3Q96AZ1 226 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
CCDC42-202ENST00000539522 C21orf62Q9NYP8 219 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 MGAM2Q2M2H8 2515 aa9.93□□□□□ -0.82
CCDC42-202ENST00000539522 TRBV7-1A0A0A6YYK4 115 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 OR2T8A6NH00 312 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 OR2C1O95371 312 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 BLOC1S1P78537 153 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 AKR1C1Q04828 323 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 FAM209BQ5JX69 171 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 UNQ9165/PRO28630Q6UXU0 137 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 SH3BGRL3Q9H299 93 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
CCDC42-202ENST00000539522 LSM4Q9Y4Z0 139 aaKnown RBP9.92□□□□□ -0.82
CCDC42-202ENST00000539522 IGKV1D-37A0A075B6S9 117 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 IGHV3-35A0A0C4DH35 117 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 TGOLN2O43493 480 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 MBP02144 154 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 ARL3P36405 182 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 CAMLGP49069 296 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 FAM74A1Q5RGS3 127 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 AKR1C8PQ5T2L2 129 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 DPPA3Q6W0C5 159 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 NPIPB3Q92617 1050 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 ATP6V0BQ99437 205 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 TXN2Q99757 166 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 RSG1Q9BU20 258 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 NPCDR1Q9BY65 106 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 KCNIP2Q9NS61 270 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 MEGF8Q7Z7M0 2845 aa9.91□□□□□ -0.82
CCDC42-202ENST00000539522 IGKV1OR2-108A0A075B7D4 117 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 ZNF705EA8MWA4 302 aaPredicted RBP9.9□□□□□ -0.82
CCDC42-202ENST00000539522 AGPAT2O15120 278 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 IGKV1-17P01599 117 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 PF4P02776 101 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 NMBP08949 121 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 IGLL1P15814 213 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 RPL29P47914 159 aaKnown RBP9.9□□□□□ -0.82
CCDC42-202ENST00000539522 MFAP4P55083 255 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 SYNJ2BPP57105 145 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 TMEM182Q6ZP80 229 aaPredicted RBP9.9□□□□□ -0.82
CCDC42-202ENST00000539522 THAP8Q8NA92 274 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 OR4X1Q8NH49 305 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 ACY3Q96HD9 319 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 MGST2Q99735 147 aa9.9□□□□□ -0.82
CCDC42-202ENST00000539522 G3V4G9 280 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 IGLC1P0CG04 106 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 NPBWR1P48145 328 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 Q56UQ5 140 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 OXLD1Q5BKU9 147 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 GPHB5Q86YW7 130 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 RCC1LQ96I51 464 aaKnown RBP9.89□□□□□ -0.83
CCDC42-202ENST00000539522 GAR1Q9NY12 217 aaKnown RBP9.89□□□□□ -0.83
CCDC42-202ENST00000539522 SLC45A2Q9UMX9 530 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
CCDC42-202ENST00000539522 TRAV30A0A087WSZ9 112 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 LINC00862A6NCI5 91 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 GNG7O60262 68 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 GGCTO75223 188 aaKnown RBP9.88□□□□□ -0.83
CCDC42-202ENST00000539522 CLN5O75503 358 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 OR10J1P30954 320 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 RND2P52198 227 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 SELENOTP62341 195 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 ACOT6Q3I5F7 207 aaPredicted RBP9.88□□□□□ -0.83
CCDC42-202ENST00000539522 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 FFAR4Q5NUL3 377 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 DPF1Q92782 380 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 TRGV9Q99603 122 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 GGTLC1Q9BX51 225 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
CCDC42-202ENST00000539522 NOTCH1P46531 2555 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 IGHV3OR16-8A0A075B7F1 116 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 TMEM213A2RRL7 107 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 ZFP92A6NM28 416 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 OVOL1O14753 267 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 FABP1P07148 127 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 CSN3P07498 182 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 ZP3P21754 424 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 RPEL1Q2QD12 228 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 TIGITQ495A1 244 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 SPSB3Q6PJ21 355 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 Q6ZRG5 221 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 CYP2G1PQ6ZSU1 146 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 C1QL4Q86Z23 238 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 RPRMQ9NS64 109 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 SLC39A9Q9NUM3 307 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 MED9Q9NWA0 146 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
CCDC42-202ENST00000539522 A8MWP6 167 aa9.86□□□□□ -0.83
CCDC42-202ENST00000539522 LGALS9O00182 355 aa9.86□□□□□ -0.83
CCDC42-202ENST00000539522 WIPF1O43516 503 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms