RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZNF701M0R085 212 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-206ENST00000539320 GIG44P09565 113 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-206ENST00000539320 PSG1P11464 419 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 C4BPBP20851 252 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 VAMP1P23763 118 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 NANOS2P60321 138 aaKnown RBP16.19■□□□□ 0.18
SCARB1-206ENST00000539320 PSMG4Q5JS54 123 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 ACTL10Q5JWF8 245 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 OR51G1Q8NGK1 321 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 DEDD2Q8WXF8 326 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 SLC35E1Q96K37 410 aa16.19■□□□□ 0.18
SCARB1-206ENST00000539320 BUB3O43684 328 aa16.18■□□□□ 0.18
SCARB1-206ENST00000539320 NUP62P37198 522 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-206ENST00000539320 RNF125Q96EQ8 232 aa16.18■□□□□ 0.18
SCARB1-206ENST00000539320 SLC25A21Q9BQT8 299 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-206ENST00000539320 FBXL17Q9UF56 701 aa16.18■□□□□ 0.18
SCARB1-206ENST00000539320 ZFP92A6NM28 416 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 FAM90A26D6RGX4 464 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 DEFB4AO15263 64 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 PITX3O75364 302 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 GPX4P36969 197 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-206ENST00000539320 CNPY1Q3B7I2 92 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 SIGLEC15Q6ZMC9 328 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 LRTM2Q8N967 370 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 Q8NAQ8 132 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 NRN1Q9NPD7 142 aa16.17■□□□□ 0.18
SCARB1-206ENST00000539320 IAPPP10997 89 aa16.16■□□□□ 0.18
SCARB1-206ENST00000539320 SLC25A6P12236 298 aa16.16■□□□□ 0.18
SCARB1-206ENST00000539320 SNRPD3P62318 126 aaKnown RBP16.16■□□□□ 0.18
SCARB1-206ENST00000539320 GAMTQ14353 236 aa16.16■□□□□ 0.18
SCARB1-206ENST00000539320 OR8G2PQ6IF36 304 aa16.16■□□□□ 0.18
SCARB1-206ENST00000539320 CCDC190Q86UF4 302 aa16.16■□□□□ 0.18
SCARB1-206ENST00000539320 PBDC1Q9BVG4 233 aa16.16■□□□□ 0.18
SCARB1-206ENST00000539320 KMT2AQ03164 3969 aa16.15■□□□□ 0.18
SCARB1-206ENST00000539320 RAB40CQ96S21 281 aa16.15■□□□□ 0.18
SCARB1-206ENST00000539320 SEPSECSQ9HD40 501 aaKnown RBP16.15■□□□□ 0.18
SCARB1-206ENST00000539320 PFDN2Q9UHV9 154 aa16.15■□□□□ 0.18
SCARB1-206ENST00000539320 IGKV1D-37A0A075B6S9 117 aa16.14■□□□□ 0.17
SCARB1-206ENST00000539320 SFT2D2O95562 160 aa16.14■□□□□ 0.17
SCARB1-206ENST00000539320 RAB11AP62491 216 aa16.14■□□□□ 0.17
SCARB1-206ENST00000539320 PPP1R1AQ13522 171 aa16.14■□□□□ 0.17
SCARB1-206ENST00000539320 CENPSQ8N2Z9 138 aa16.14■□□□□ 0.17
SCARB1-206ENST00000539320 TMED3Q9Y3Q3 217 aa16.14■□□□□ 0.17
SCARB1-206ENST00000539320 IGHV4-28A0A0C4DH34 117 aa16.13■□□□□ 0.17
SCARB1-206ENST00000539320 ZNF705EA8MWA4 302 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-206ENST00000539320 MED6O75586 246 aa16.13■□□□□ 0.17
SCARB1-206ENST00000539320 FABP1P07148 127 aa16.13■□□□□ 0.17
SCARB1-206ENST00000539320 MIFP14174 115 aa16.13■□□□□ 0.17
SCARB1-206ENST00000539320 LYZP61626 148 aa16.13■□□□□ 0.17
SCARB1-206ENST00000539320 ZNF90Q03938 601 aa16.13■□□□□ 0.17
SCARB1-206ENST00000539320 PAIP2BQ9ULR5 123 aaKnown RBP16.13■□□□□ 0.17
SCARB1-206ENST00000539320 SPANXN2Q5MJ10 180 aa16.12■□□□□ 0.17
SCARB1-206ENST00000539320 CIB3Q96Q77 187 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-206ENST00000539320 SRRQ9GZT4 340 aa16.12■□□□□ 0.17
SCARB1-206ENST00000539320 CLEC5AQ9NY25 188 aa16.12■□□□□ 0.17
SCARB1-206ENST00000539320 TRGV9Q99603 122 aa16.11■□□□□ 0.17
SCARB1-206ENST00000539320 HRH4Q9H3N8 390 aa16.11■□□□□ 0.17
SCARB1-206ENST00000539320 TBC1D24Q9ULP9 559 aa16.11■□□□□ 0.17
SCARB1-206ENST00000539320 X6R8D5 127 aa16.11■□□□□ 0.17
SCARB1-206ENST00000539320 HOXB5P09067 269 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 RBMY1A1P0DJD3 496 aaKnown RBP16.1■□□□□ 0.17
SCARB1-206ENST00000539320 RBMY1CP0DJD4 496 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 UBE2MP61081 183 aaKnown RBP16.1■□□□□ 0.17
SCARB1-206ENST00000539320 OR2F1Q13607 317 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 RBMY1FQ15415 496 aaKnown RBP16.1■□□□□ 0.17
SCARB1-206ENST00000539320 LGALS9CQ6DKI2 356 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 THAP8Q8NA92 274 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 CSNK1G2-AS1Q8NCQ2 148 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 MAGT1Q9H0U3 335 aa16.1■□□□□ 0.17
SCARB1-206ENST00000539320 H3BMM0 161 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 SYNGR2O43760 224 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 HLA-DRB4P13762 266 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 NKX2-1P43699 371 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-206ENST00000539320 NUTF2P61970 127 aaKnown RBP16.09■□□□□ 0.17
SCARB1-206ENST00000539320 RPP30P78346 268 aaKnown RBP16.09■□□□□ 0.17
SCARB1-206ENST00000539320 GGNBP1Q5YKI7 109 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 TRIQKQ629K1 86 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 C2CD4CQ8TF44 421 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 PPP1R14BQ96C90 147 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 C1QTNF4Q9BXJ3 329 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 HLA-DRB4X5D2U9 266 aa16.09■□□□□ 0.17
SCARB1-206ENST00000539320 SNRPGP15A8MWD9 76 aa16.08■□□□□ 0.16
SCARB1-206ENST00000539320 WRBO00258 174 aa16.08■□□□□ 0.16
SCARB1-206ENST00000539320 INPP1P49441 399 aa16.08■□□□□ 0.16
SCARB1-206ENST00000539320 C1orf194Q5T5A4 169 aa16.08■□□□□ 0.16
SCARB1-206ENST00000539320 VPS13DQ5THJ4 4388 aa16.08■□□□□ 0.16
SCARB1-206ENST00000539320 IGKV1OR2-108A0A075B7D4 117 aa16.07■□□□□ 0.16
SCARB1-206ENST00000539320 C11orf94C9JXX5 98 aa16.07■□□□□ 0.16
SCARB1-206ENST00000539320 WDR12Q9GZL7 423 aaKnown RBP16.07■□□□□ 0.16
SCARB1-206ENST00000539320 XCL2Q9UBD3 114 aa16.07■□□□□ 0.16
SCARB1-206ENST00000539320 NAP1L6A6NFF2 107 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 PRSS46E5RG02 174 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 NDUFB6O95139 128 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 HLA-DMBP28068 263 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 ID1P41134 155 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 PSMB3P49720 205 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 TCTAP57738 103 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 PTTG2Q9NZH5 202 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 DNAH6Q9C0G6 4158 aa16.06■□□□□ 0.16
SCARB1-206ENST00000539320 ELOA3CA0A087WX78 387 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms