RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 EPDR1Q9UM22 224 aa1.56□□□□□ -2.16
SNHG1-210ENST00000539303 ARHGEF10O15013 1369 aa1.56□□□□□ -2.16
SNHG1-210ENST00000539303 TECPR2O15040 1411 aa1.56□□□□□ -2.16
SNHG1-210ENST00000539303 EML6Q6ZMW3 1958 aa1.56□□□□□ -2.16
SNHG1-210ENST00000539303 MEIS3P1A6NDR6 274 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 SDHAF1A6NFY7 115 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 OR51F1A6NGY5 319 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 J3QQQ9 107 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 NDUFB3O43676 98 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 CXCL1P09341 107 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 PEBP1P30086 187 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 POLR2HP52434 150 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 GTF2A1P52655 376 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 ARPP19P56211 112 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 RPL26P61254 145 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 PLCXD2Q0VAA5 305 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 MSMO1Q15800 293 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 ZNF791Q3KP31 576 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 EIF5AL1Q6IS14 154 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 C22orf39Q6P5X5 142 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 HRCT1Q6UXD1 115 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 LRRC28Q86X40 367 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 DHFR2Q86XF0 187 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 ANGPTL5Q86XS5 388 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 PDZD9Q8IXQ8 264 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 AQP3Q92482 292 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 ZNF714Q96N38 554 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 SLC25A21Q9BQT8 299 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 Q9BRP9 147 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 ADAT1Q9BUB4 502 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 YIPF3Q9GZM5 350 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 POPDC3Q9HBV1 291 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 GSKIPQ9P0R6 139 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 RPL26L1Q9UNX3 145 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 SCN8AQ9UQD0 1980 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 SDK2Q58EX2 2172 aa1.55□□□□□ -2.16
SNHG1-210ENST00000539303 ZCCHC11Q5TAX3 1644 aaKnown RBP1.55□□□□□ -2.16
SNHG1-210ENST00000539303 NUP210Q8TEM1 1887 aaPredicted RBP1.54□□□□□ -2.16
SNHG1-210ENST00000539303 MYH10P35580 1976 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 TRDV1A0A1B0GX56 115 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 GABARAPH6UMI1 98 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 H7BYZ3 331 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 J3KT08 172 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 DEGS1O15121 323 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 CST7O76096 145 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 GADD45GO95257 159 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 PMP2P02689 132 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 SHBGP04278 402 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 P0C880 135 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 COX6A1P12074 109 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 RPS3P23396 243 aaKnown RBP eCLIP1.54□□□□□ -2.16
SNHG1-210ENST00000539303 AQP4P55087 323 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 DYNLT1P63172 113 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 MYL5Q02045 173 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 SLC38A11Q08AI6 406 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 SOSTDC1Q6X4U4 206 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 BRD3OSQ6XYD6 125 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 SLC30A7Q8NEW0 376 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 OR8B3Q8NGG8 313 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 OR2T10Q8NGZ9 312 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 BORCS5Q969J3 196 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 ZC2HC1AQ96GY0 325 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 NPCDR1Q9BY65 106 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 TMEM126AQ9H061 195 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 TMEM138Q9NPI0 162 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 OTORQ9NRC9 128 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 NAT8BQ9UHF3 227 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 JPT1Q9UK76 154 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 MED31Q9Y3C7 131 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 KIF24Q5T7B8 1368 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 LTBP2Q14767 1821 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 KIAA2026Q5HYC2 2103 aa1.54□□□□□ -2.16
SNHG1-210ENST00000539303 RIMBP3CA6NJZ7 1639 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 RIMBP3BA6NNM3 1639 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 SDCBPO00560 298 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 OVOL1O14753 267 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 PGLYRP1O75594 196 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 LYZL6O75951 148 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 SLIT2O94813 1529 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 CLPSP04118 112 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 FABP2P12104 132 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 HLA-EP13747 358 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 COL5A1P20908 1838 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 FKBP2P26885 142 aaKnown RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 FUSP35637 526 aaKnown RBP eCLIP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 CAMSAP2Q08AD1 1489 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 EIF3IQ13347 325 aaKnown RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 ZNF345Q14585 488 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 OR8B8Q15620 311 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 NNATQ16517 81 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 CCDC153Q494R4 210 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 RIC1Q4ADV7 1423 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 BRMS1LQ5PSV4 323 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 VIRMAQ69YN4 1812 aaKnown RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 CD109Q6YHK3 1445 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 Q6ZQT0 140 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 DEFB128Q7Z7B8 93 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 N4BP2Q86UW6 1770 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 PRR15Q8IV56 129 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 LINC00471Q8N535 108 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms