RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 HSPE1P61604 102 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PPP1CBP62140 327 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RPS11P62280 158 aaKnown RBP eCLIP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 LCN6P62502 163 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RPS25P62851 125 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF85Q03923 595 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 UNC119Q13432 240 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GPR50Q13585 617 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GINS1Q14691 196 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RAB35Q15286 201 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GUCA2BQ16661 112 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF181Q2M3W8 571 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ACOT6Q3I5F7 207 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PYY3Q5JQD4 70 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 TEX36Q5VZQ5 186 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM236Q5W0B7 351 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GLT8D1Q68CQ7 371 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 XAF1Q6GPH4 301 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 LEG1Q6P5S2 330 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RASL11AQ6T310 242 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 UGT2A3Q6UWM9 527 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 FBXW12Q6X9E4 464 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 Q6ZR03 302 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GOLT1AQ6ZVE7 132 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 SSX8Q7RTT4 187 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 AAED1Q7RTV5 226 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 COX8CQ7Z4L0 72 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 H1FOOQ8IZA3 346 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF101Q8IZC7 436 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 SVBPQ8N300 66 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 Q8N377 158 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PNKDQ8N490 385 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GBGT1Q8N5D6 347 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2T33Q8NG76 320 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR10D4PQ8NGN7 298 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4X1Q8NH49 305 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR1S1Q8NH92 325 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OTOSQ8NHW6 89 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF420Q8TAQ5 688 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR51E1Q8TCB6 317 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF418Q8TF45 676 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ARPC1AQ92747 370 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC35E1Q96K37 410 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ERMAPQ96PL5 475 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NMNAT3Q96T66 252 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NRIP2Q9BQI9 281 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NDFIP1Q9BT67 221 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 DERL1Q9BUN8 251 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 TSSK6Q9BXA6 273 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF436Q9C0F3 470 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2H1Q9GZK4 316 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR51E2Q9H255 320 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 DUSP21Q9H596 190 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF331Q9NQX6 463 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 LYRM2Q9NU23 88 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 UQCC1Q9NVA1 299 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RPS6KB2Q9UBS0 482 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 Q9UF83 564 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NAT8Q9UHE5 227 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NAT8BQ9UHF3 227 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PRNDQ9UKY0 176 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 POLR1DQ9Y2S0 133 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 KLF12Q9Y4X4 402 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR51B2Q9Y5P1 312 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 IER3IP1Q9Y5U9 82 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 SOX21Q9Y651 276 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 COL6A5A8TX70 2615 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 STAB1Q9NY15 2570 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 KIAA2026Q5HYC2 2103 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A087WX48 190 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAV38-1A0A0B4J264 116 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TRBV5-5A0A0J9YX44 114 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 LOC100130705A0A1B0GUX0 176 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A1B0GV50 99 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM183AA6NL82 134 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4C45A6NMZ5 311 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 RIIAD1A6NNX1 92 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 LYRM9A8MSI8 78 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF705GA8MUZ8 300 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 A8MXK9 166 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 IQCF6A8MYZ5 107 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 EEF1E1-BLOC1S5C9J1V9 151 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 C9JAW5 83 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM90A26D6RGX4 464 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SMKR1H3BMG3 65 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 H7C417 338 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 M0R1B8 84 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 RER1O15258 196 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 EEF1E1O43324 174 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 BCL2L11O43521 198 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SYNGR1O43759 233 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GPR137BO60478 399 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 MRPS14O60783 128 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ARL6IP5O75915 188 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 UBL3O95164 117 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 DUS4LO95620 317 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2H2O95918 312 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 HPRT1P00492 218 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 NGFP01138 241 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms