RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 CNTFRP26992 372 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 MAS1LP35410 378 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 SRSF4Q08170 494 aaKnown RBP7.08□□□□□ -1.28
GGA3-202ENST00000538886 TMEM267Q0VDI3 215 aaPredicted RBP7.08□□□□□ -1.28
GGA3-202ENST00000538886 ICAM4Q14773 271 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 OR5C1Q8NGR4 320 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 C20orf144Q9BQM9 153 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 SMDT1Q9H4I9 107 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 C3orf85A0A1B0GTC6 90 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 GAGE12BA1L429 117 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 YPEL1O60688 119 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 PF4P02776 101 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 IGKV1-16P04430 117 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 MELTFP08582 738 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 VDAC2P45880 294 aaPredicted RBP7.08□□□□□ -1.28
GGA3-202ENST00000538886 OR8I2Q8N0Y5 310 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 ZNF645Q8N7E2 425 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 ST6GALNAC6Q969X2 333 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
GGA3-202ENST00000538886 YPEL2Q96QA6 119 aa7.08□□□□□ -1.28
GGA3-202ENST00000538886 NF1P21359 2839 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 IGKV1-6A0A0C4DH72 117 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 SSSCA1O60232 199 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 DEDDO75618 318 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 IGHV3-23P01764 117 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 SLC35B1P78383 322 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 FFAR4Q5NUL3 377 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 OR4P4Q8NGL7 312 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 OR4F5Q8NH21 305 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 OR4F4Q96R69 305 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 HSD17B10Q99714 261 aaKnown RBP7.07□□□□□ -1.28
GGA3-202ENST00000538886 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 WFDC1Q9HC57 220 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 TRAV30A0A087WSZ9 112 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 SPINK4O60575 86 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 S1PR2O95136 353 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 F2RP25116 425 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 C10orf55Q5SWW7 151 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 DNM1P46Q6ZS02 220 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 STXBP6Q8NFX7 210 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 FAM110DQ8TAY7 271 aaPredicted RBP7.07□□□□□ -1.28
GGA3-202ENST00000538886 ADTRPQ96IZ2 230 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 SIRPDQ9H106 197 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 SVEP1Q4LDE5 3571 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 IGHV3OR16-8A0A075B7F1 116 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 GAGE10A6NGK3 116 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 RAMP3O60896 148 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 NDUFB8O95169 186 aa7.07□□□□□ -1.28
GGA3-202ENST00000538886 MRPL52Q86TS9 123 aaKnown RBP7.07□□□□□ -1.28
GGA3-202ENST00000538886 DNAJC9-AS1A6NH13 148 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 H0Y8G0 127 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 CLEC3BP05452 202 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 HTD2P86397 168 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 SPANXN5Q5MJ07 72 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 CRIP3Q6Q6R5 217 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 C1orf229Q6ZS94 237 aaPredicted RBP7.06□□□□□ -1.28
GGA3-202ENST00000538886 LINC01551Q86U37 167 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 CACNG5Q9UF02 275 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 ARL2-SNX15V9GYD0 113 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 CHST1O43916 411 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 CRLF1O75462 422 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 PGLYRP1O75594 196 aaPredicted RBP7.06□□□□□ -1.28
GGA3-202ENST00000538886 CDS2O95674 445 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 KLF17Q5JT82 389 aaPredicted RBP7.06□□□□□ -1.28
GGA3-202ENST00000538886 FAM216AQ8WUB2 273 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 IMMP2LQ96T52 175 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 NAT8Q9UHE5 227 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 PLP1P60201 277 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 MINOS1Q5TGZ0 78 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 DYNAPQ8N1N2 210 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 YPEL4Q96NS1 127 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 PLEKHA3Q9HB20 300 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 SLC39A9Q9NUM3 307 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 GPR132Q9UNW8 380 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 MINOS1-NBL1R4GNA1 71 aa7.06□□□□□ -1.28
GGA3-202ENST00000538886 C15orf65H3BRN8 121 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 NBR2O15453 112 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 SERF1AO75920 110 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 Q6ZSR3 168 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 SLC25A48Q6ZT89 311 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 OR4D5Q8NGN0 318 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 ZC2HC1AQ96GY0 325 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 TCRBV4S1A1TA0A5B7 111 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 OR2T8A6NH00 312 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 CORTO00230 105 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 EWSR1Q01844 656 aaKnown RBP eCLIP7.05□□□□□ -1.28
GGA3-202ENST00000538886 ZNF90Q03938 601 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 LYZL2Q7Z4W2 148 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 OR2C3Q8N628 320 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 OR4X2Q8NGF9 303 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 VSTM2AQ8TAG5 236 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 GNPNAT1Q96EK6 184 aaPredicted RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 CHRDL1Q9BU40 450 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 MBNL3Q9NUK0 354 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 FBLN5Q9UBX5 448 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms