RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GAMTQ14353 236 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 GLMPQ8WWB7 406 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 LINC00854A0A1B0GVQ3 168 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 SYNGR2O43760 224 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 ADAP1O75689 374 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 IFNA4P05014 189 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 OR4E1P0C645 316 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 PSG1P11464 419 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 STHQ8IWL8 128 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 DCANP1Q8TF63 244 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 GATAD1Q8WUU5 269 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 RARRES2Q99969 163 aa10.96□□□□□ -0.65
RAB40B-202ENST00000538809 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
RAB40B-202ENST00000538809 NUPR2A6NF83 97 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 MED6O75586 246 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 RD3LP0DJH9 198 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 ANXA7P20073 488 aaKnown RBP10.95□□□□□ -0.66
RAB40B-202ENST00000538809 ID3Q02535 119 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 OR51G1Q8NGK1 321 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 OR11H2Q8NH07 326 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 CIB3Q96Q77 187 aaPredicted RBP10.95□□□□□ -0.66
RAB40B-202ENST00000538809 MAGT1Q9H0U3 335 aa10.95□□□□□ -0.66
RAB40B-202ENST00000538809 IGKV1OR2-108A0A075B7D4 117 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 CENPXA8MT69 81 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 DEFB4AO15263 64 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 BUB3O43684 328 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 RAB11AP62491 216 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 TRPT1Q86TN4 253 aaKnown RBP10.94□□□□□ -0.66
RAB40B-202ENST00000538809 TMEM217Q8N7C4 229 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 OR4D5Q8NGN0 318 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 SLC35E1Q96K37 410 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 PBDC1Q9BVG4 233 aa10.94□□□□□ -0.66
RAB40B-202ENST00000538809 PAIP2BQ9ULR5 123 aaKnown RBP10.94□□□□□ -0.66
RAB40B-202ENST00000538809 HELTA6NFD8 242 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 ZFP92A6NM28 416 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 WRBO00258 174 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 LYRM1O43325 122 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 C4BPBP20851 252 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 EIF2B2P49770 351 aaKnown RBP10.93□□□□□ -0.66
RAB40B-202ENST00000538809 ZNF90Q03938 601 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 CNPY1Q3B7I2 92 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 ACTL10Q5JWF8 245 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 CEMP1Q6PRD7 247 aaPredicted RBP10.93□□□□□ -0.66
RAB40B-202ENST00000538809 LINC00299Q6ZSB3 139 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 COQ8AQ8NI60 647 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 LINC00476Q8WZB0 136 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 TRGV9Q99603 122 aa10.93□□□□□ -0.66
RAB40B-202ENST00000538809 ATF4P18848 351 aaPredicted RBP10.92□□□□□ -0.66
RAB40B-202ENST00000538809 OR8G2PQ6IF36 304 aa10.92□□□□□ -0.66
RAB40B-202ENST00000538809 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
RAB40B-202ENST00000538809 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
RAB40B-202ENST00000538809 C20orf85Q9H1P6 137 aa10.92□□□□□ -0.66
RAB40B-202ENST00000538809 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
RAB40B-202ENST00000538809 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 LY6G6CO95867 125 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 GIG44P09565 113 aaPredicted RBP10.91□□□□□ -0.66
RAB40B-202ENST00000538809 AP2S1P53680 142 aaPredicted RBP10.91□□□□□ -0.66
RAB40B-202ENST00000538809 NANOS2P60321 138 aaKnown RBP10.91□□□□□ -0.66
RAB40B-202ENST00000538809 LYZP61626 148 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 POLR2GP62487 172 aaKnown RBP eCLIP10.91□□□□□ -0.66
RAB40B-202ENST00000538809 RPP30P78346 268 aaKnown RBP10.91□□□□□ -0.66
RAB40B-202ENST00000538809 OR2F1Q13607 317 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 C4orf46Q504U0 113 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
RAB40B-202ENST00000538809 CCDC32Q9BV29 185 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 NRN1Q9NPD7 142 aa10.91□□□□□ -0.66
RAB40B-202ENST00000538809 H3BP45 60 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 TCRBP04435 133 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 SPP1P10451 314 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 NKX2-1P43699 371 aaPredicted RBP10.9□□□□□ -0.66
RAB40B-202ENST00000538809 PAX9P55771 341 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 SPANXN5Q5MJ07 72 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 GSG1LQ6UXU4 331 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 CLEC5AQ9NY25 188 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 FBXL17Q9UF56 701 aa10.9□□□□□ -0.66
RAB40B-202ENST00000538809 A6NHS1 94 aa10.89□□□□□ -0.67
RAB40B-202ENST00000538809 IFNA21P01568 189 aa10.89□□□□□ -0.67
RAB40B-202ENST00000538809 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
RAB40B-202ENST00000538809 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
RAB40B-202ENST00000538809 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
RAB40B-202ENST00000538809 RAB40CQ96S21 281 aa10.89□□□□□ -0.67
RAB40B-202ENST00000538809 SEPSECSQ9HD40 501 aaKnown RBP10.89□□□□□ -0.67
RAB40B-202ENST00000538809 KLK5Q9Y337 293 aaPredicted RBP10.89□□□□□ -0.67
RAB40B-202ENST00000538809 STRAPQ9Y3F4 350 aaKnown RBP10.89□□□□□ -0.67
RAB40B-202ENST00000538809 FABP1P07148 127 aa10.88□□□□□ -0.67
RAB40B-202ENST00000538809 NUP62P37198 522 aaPredicted RBP10.88□□□□□ -0.67
RAB40B-202ENST00000538809 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
RAB40B-202ENST00000538809 TMEM14EPQ6UXP3 125 aa10.88□□□□□ -0.67
RAB40B-202ENST00000538809 ACOT7LQ6ZUV0 252 aa10.88□□□□□ -0.67
RAB40B-202ENST00000538809 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
RAB40B-202ENST00000538809 Q8NAQ8 132 aa10.88□□□□□ -0.67
RAB40B-202ENST00000538809 PSENENQ9NZ42 101 aa10.88□□□□□ -0.67
RAB40B-202ENST00000538809 TBC1D24Q9ULP9 559 aa10.88□□□□□ -0.67
RAB40B-202ENST00000538809 RCL1Q9Y2P8 373 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms