RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-210	ENST00000538318	DNAH2	Q9P225	4427 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	DEFB131B	A0A096LNP1	70 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	IFNA10	P01566	189 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	AMBP	P02760	352 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	HLA-DRB4	P13762	266 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	SPCS2	Q15005	226 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZNF767P	Q75MW2	155 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	OR51G1	Q8NGK1	321 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	RNF125	Q96EQ8	232 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	HSPB7	Q9UBY9	170 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	RABL2B	Q9UNT1	228 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	KCNIP3	Q9Y2W7	256 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	HLA-DRB4	X5D2U9	266 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	FAT2	Q9NYQ8	4349 aa		12.01	□□□□□ -0.49
PTPN6-210	ENST00000538318	NKX2-1	P43699	371 aa	Predicted RBP	12	□□□□□ -0.49
PTPN6-210	ENST00000538318	CCR6	P51684	374 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318	KLF9	Q13886	244 aa	Predicted RBP	12	□□□□□ -0.49
PTPN6-210	ENST00000538318	IL18	Q14116	193 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12	□□□□□ -0.49
PTPN6-210	ENST00000538318	LINC00336	Q6ZUF6	198 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12	□□□□□ -0.49
PTPN6-210	ENST00000538318	DTD1	Q8TEA8	209 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318	DIRAS2	Q96HU8	199 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318	NEU1	Q99519	415 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318	PRR13	Q9NZ81	148 aa		12	□□□□□ -0.49
PTPN6-210	ENST00000538318		A0A0B4J2A0	478 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	ANKRD20A5P	A0PJZ0	165 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	NUP62	P37198	522 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	SMCO1	Q147U7	214 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	LGI3	Q8N145	548 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	SCGB3A2	Q96PL1	93 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	RBKS	Q9H477	322 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	SHPK	Q9UHJ6	478 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	DNAH17	Q9UFH2	4485 aa		11.99	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZNF705D	P0CH99	300 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZNF705B	P0CI00	300 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	ALDH3B2	P48448	385 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	ATP5I	P56385	69 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	SUPT4H1	P63272	117 aa	Known RBP	11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	GDF5OS	Q5U4N7	250 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	OR8G2P	Q6IF36	304 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	LYZL2	Q7Z4W2	148 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	GPR141	Q7Z602	305 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	POM121L12	Q8N7R1	296 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	NDUFAF3	Q9BU61	184 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	SCRT1	Q9BWW7	348 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	PFDN2	Q9UHV9	154 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	SCP2D1	Q9UJQ7	156 aa		11.98	□□□□□ -0.49
PTPN6-210	ENST00000538318	IGKV1D-37	A0A075B6S9	117 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	SMIM9	A6NGZ8	99 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318		P0DMU3	169 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	FAM231A	P0DMU4	169 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	FAM231C	P0DMU5	169 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	GPX4	P36969	197 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZNF90	Q03938	601 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	GAMT	Q14353	236 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	CLUHP3	Q96NS8	147 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	PBDC1	Q9BVG4	233 aa		11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	MRPS26	Q9BYN8	205 aa	Known RBP	11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	WDR12	Q9GZL7	423 aa	Known RBP	11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	SAV1	Q9H4B6	383 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN6-210	ENST00000538318	TMEM189	A5PLL7	270 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	ZFP92	A6NM28	416 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	SPART-AS1	P0CW21	52 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	AKR1C4	P17516	323 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	ID1	P41134	155 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	PSMB3	P49720	205 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	DEFB1	P60022	68 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	C1orf194	Q5T5A4	169 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	FOXI2	Q6ZQN5	318 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318	DYNC2LI1	Q8TCX1	351 aa		11.96	□□□□□ -0.49
PTPN6-210	ENST00000538318		A0A1B0GVY2	172 aa		11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	SOCS3	O14543	225 aa		11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	SRPX	P78539	464 aa		11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	ZNF709	Q8N972	641 aa		11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	SLC35E1	Q96K37	410 aa		11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	LINC00052	Q96N35	136 aa		11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	CCDC59	Q9P031	241 aa	Known RBP	11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	RSL24D1	Q9UHA3	163 aa	Known RBP	11.95	□□□□□ -0.5
PTPN6-210	ENST00000538318	SNRPGP15	A8MWD9	76 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	IGKV3-20	P01619	116 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	ANXA3	P12429	323 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	FXYD7	P58549	80 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	ZNF79	Q15937	498 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	SPATA31B1P	Q5VZV4	182 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	OR1S1	Q8NH92	325 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	RAB2B	Q8WUD1	216 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	MCUB	Q9NWR8	336 aa		11.94	□□□□□ -0.5
PTPN6-210	ENST00000538318	PKHD1	P08F94	4074 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	PIGBOS1	A0A0B4J2F0	54 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	PITX3	O75364	302 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	FABP1	P07148	127 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	EMP1	P54849	157 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	LYZ	P61626	148 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	TRGV9	Q99603	122 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	SOST	Q9BQB4	213 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	DKK2	Q9UBU2	259 aa		11.93	□□□□□ -0.5
PTPN6-210	ENST00000538318	RFNG	Q9Y644	331 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms