RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 GALR1P47211 349 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 UCP3P55916 312 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 TMEM30BQ3MIR4 351 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 ST6GAL2Q96JF0 529 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 SLA2Q9H6Q3 261 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 MED9Q9NWA0 146 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 PEMTQ9UBM1 199 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 PMS2P5A8MQ11 134 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 SPRY2O43597 315 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 CGB3P0DN86 165 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 CGB7P0DN87 165 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 SULT1A1P50225 295 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 RELQ04864 619 aaPredicted RBP5.65□□□□□ -1.5
MSH6-209ENST00000538136 TOR2AQ5JU69 321 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 ASPHD1Q5U4P2 390 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 LHFPL1Q86WI0 220 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 OR1L6Q8NGR2 347 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 CHAC2Q8WUX2 184 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
MSH6-209ENST00000538136 RNF125Q96EQ8 232 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 ARPC5LQ9BPX5 153 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 BET1LQ9NYM9 111 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 F11RQ9Y624 299 aaKnown RBP5.65□□□□□ -1.5
MSH6-209ENST00000538136 PGPA6NDG6 321 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 DEFB130BP0DP73 79 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 DEFB130AP0DP74 79 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 ATP6V0CP27449 155 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 TREML4Q6UXN2 200 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 TMUB2Q71RG4 321 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 STPG3Q8N7X2 389 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 RNF2Q99496 336 aa5.65□□□□□ -1.51
MSH6-209ENST00000538136 F5H697 171 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 IGHV3-53P01767 116 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 ORM1P02763 201 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 PPIFP30405 207 aaKnown RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 ARL16Q0P5N6 197 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 ACOT6Q3I5F7 207 aaPredicted RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 TOMM20LQ6UXN7 152 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 Q8NFD4 153 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 ST6GALNAC6Q969X2 333 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 FNDC4Q9H6D8 234 aaPredicted RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 MRPL36Q9P0J6 103 aaKnown RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 TMEM56-RWDD3S4R434 201 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 TRAV12-2A0A075B6T6 113 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 A0A1W2PS18 150 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 G3V4G9 280 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 FGF16O43320 207 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 CD7P09564 240 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 CDC34P49427 236 aaPredicted RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 TAS2R30P59541 319 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 LINC00477Q96M19 166 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 VPS13CQ709C8 3753 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 CXorf65A6NEN9 183 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 TGOLN2O43493 480 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 TMEM127O75204 238 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 TMEM50AO95807 157 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 M6PRP20645 277 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 SPATA31B1PQ5VZV4 182 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 DDB2Q92466 427 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 IFT22Q9H7X7 185 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 ZNF702PQ9H963 129 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 ZNF705FA8MVS1 300 aaPredicted RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 ODF3BA8MYP8 253 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 H0YIZ8 118 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 HLA-DRB1P01911 266 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 GP9P14770 177 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 BMI1P35226 326 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 SNRPD3P62318 126 aaKnown RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 FLI1Q01543 452 aaPredicted RBP5.64□□□□□ -1.51
MSH6-209ENST00000538136 MIR17HGQ75NE6 70 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 EXOC3-AS1Q8N2X6 119 aa5.64□□□□□ -1.51
MSH6-209ENST00000538136 TRBV6-6A0A0A6YYG2 114 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 RNASE1P07998 156 aaKnown RBP5.63□□□□□ -1.51
MSH6-209ENST00000538136 P2RY1P47900 373 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 TAS2R45P59539 299 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 CD300EQ496F6 205 aaPredicted RBP5.63□□□□□ -1.51
MSH6-209ENST00000538136 S100A7AQ86SG5 101 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 LINC00311Q8N616 119 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 COMMD1Q8N668 190 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 DEFB125Q8N687 156 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 TMEM116Q8NCL8 245 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 OR1P1Q8NH06 330 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 PAXXQ9BUH6 204 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 ACTR3CQ9C0K3 210 aaPredicted RBP5.63□□□□□ -1.51
MSH6-209ENST00000538136 DNAJC4Q9NNZ3 241 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 IGHG2P01859 326 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 GIPP09681 153 aaPredicted RBP5.63□□□□□ -1.51
MSH6-209ENST00000538136 RNASE2P10153 161 aaKnown RBP5.63□□□□□ -1.51
MSH6-209ENST00000538136 AKR1C3P42330 323 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 ZNF880Q6PDB4 577 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 GOLT1AQ6ZVE7 132 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 Q8TAT8 98 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 PIFOQ8TCI5 191 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 GALNT14Q96FL9 552 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 FAM212BQ9NTI7 297 aaPredicted RBP5.63□□□□□ -1.51
MSH6-209ENST00000538136 URGCP-MRPS24S4R325 110 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 MAP1LC3B2A6NCE7 125 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 TCL1AP56279 114 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms