RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 C1orf122Q6ZSJ8 110 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 OR4A5Q8NH83 315 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 PIFOQ8TCI5 191 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 ADAMTS9Q9P2N4 1935 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 IGKCP01834 107 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 PRSS2P07478 247 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 CITED1Q99966 193 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 KIAA0100Q14667 2235 aaKnown RBP4.46□□□□□ -1.7
PTPRD-213ENST00000537002 A0A1W2PPM0 123 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 C2orf70A6NJV1 201 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV1D-33P01593 117 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV1-33P01594 117 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 CLPSP04118 112 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 RPL27AP46776 148 aaKnown RBP4.46□□□□□ -1.7
PTPRD-213ENST00000537002 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 GAGE2EQ4V326 116 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 ORMDL3Q8N138 153 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 GCSAMQ8N6F7 178 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 GPR82Q96P67 336 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 RCHY1Q96PM5 261 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 Q9H3A6 140 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 GAGE2DQ9UEU5 116 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 TRAV24A0A0B4J272 114 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SAP30O75446 220 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 HLA-DRB4P13762 266 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-213ENST00000537002 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF114Q8NC26 417 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 HLA-DRB4X5D2U9 266 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 A8MWV9 139 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 LGALS7P47929 136 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SSBP2P81877 361 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-213ENST00000537002 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 RNF138Q8WVD3 245 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SLC25A2Q9BXI2 301 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SCRT2Q9NQ03 307 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 MBNL3Q9NUK0 354 aaKnown RBP4.45□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF883P0CG24 379 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 ERVK11-1P61568 191 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 Q6ZRM9 215 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 TIMD4Q96H15 378 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 PRO3102Q9H379 93 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 MGST2Q99735 147 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 CITED2Q99967 270 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SRSF8Q9BRL6 282 aaKnown RBP4.45□□□□□ -1.7
PTPRD-213ENST00000537002 F5P12259 2224 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 SPACA3Q8IXA5 215 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 CYYR1Q96J86 154 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 CHAC1Q9BUX1 264 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 GGTLC1Q9BX51 225 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 IDI2-AS1Q9NZ38 188 aa4.45□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV3-7A0A075B6H7 116 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 SMAD7O15105 426 aaKnown RBP4.44□□□□□ -1.7
PTPRD-213ENST00000537002 CD24P25063 80 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 ASPHD1Q5U4P2 390 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 EPDR1Q9UM22 224 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 RAXQ9Y2V3 346 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 USF3Q68DE3 2245 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 KMT2EQ8IZD2 1858 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 NCR2O95944 276 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 WDR82Q6UXN9 313 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 SLC25A48Q6ZT89 311 aaKnown RBP4.44□□□□□ -1.7
PTPRD-213ENST00000537002 VGLL1Q99990 258 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 C1QTNF5Q9BXJ0 243 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 TTTY12Q9BZ98 90 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 ZNF492Q9P255 531 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 DPM2O94777 84 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 CCL4P13236 92 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 TMEM155Q4W5P6 130 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 TEX45Q8NA69 505 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 OR5AN1Q8NGI8 311 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV1-24A0A0C4DH33 117 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 SPAARA0A1B0GVQ0 90 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV1-45A0A0A0MS14 117 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 LGALS9BQ3B8N2 356 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 TMEM78Q5T7P6 136 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 LGALS9CQ6DKI2 356 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 CACNG8Q8WXS5 425 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 ZC2HC1AQ96GY0 325 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 PILRBQ9UKJ0 227 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 NCOA6Q14686 2063 aaPredicted RBP4.44□□□□□ -1.7
PTPRD-213ENST00000537002 ARHGEF17Q96PE2 2063 aaPredicted RBP4.44□□□□□ -1.7
PTPRD-213ENST00000537002 CPAMD8Q8IZJ3 1885 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 D6R8Y8 96 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 P0C879 139 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 EVI2AP22794 236 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 NPPCP23582 126 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 CT55Q8WUE5 264 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 ARPC1AQ92747 370 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 S4R3C0 116 aa4.44□□□□□ -1.7
PTPRD-213ENST00000537002 ATP5LO75964 103 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 NBL1P41271 181 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 F2RL2O00254 374 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 CELA3AP09093 270 aa4.43□□□□□ -1.7
PTPRD-213ENST00000537002 KLRD1Q13241 179 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms