RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 OR1N2Q8NGR9 330 aa8.85□□□□□ -0.99
CDCA3-206ENST00000536241 OR2G3Q8NGZ4 309 aa8.85□□□□□ -0.99
CDCA3-206ENST00000536241 GNPNAT1Q96EK6 184 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-206ENST00000536241 CITED1Q99966 193 aa8.85□□□□□ -0.99
CDCA3-206ENST00000536241 SLC39A9Q9NUM3 307 aa8.85□□□□□ -0.99
CDCA3-206ENST00000536241 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
CDCA3-206ENST00000536241 PUS1Q9Y606 427 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDCA3-206ENST00000536241 PXMP4Q9Y6I8 212 aa8.85□□□□□ -0.99
CDCA3-206ENST00000536241 IGHV3OR16-8A0A075B7F1 116 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 YIF1AO95070 293 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 FABP1P07148 127 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 B2MP61769 119 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 SELENOTP62341 195 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 PRR20EP86478 221 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 PRR20CP86479 221 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 PRR20DP86480 221 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 PRR20BP86481 221 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 PRR20AP86496 221 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 RELQ04864 619 aaPredicted RBP8.84□□□□□ -0.99
CDCA3-206ENST00000536241 FFAR4Q5NUL3 377 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 TOMM20LQ6UXN7 152 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 Q6ZRG5 221 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 NDUFA11Q86Y39 141 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 OR51G1Q8NGK1 321 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 DPF1Q92782 380 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 RCC1LQ96I51 464 aaKnown RBP8.84□□□□□ -0.99
CDCA3-206ENST00000536241 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
CDCA3-206ENST00000536241 TIMM9Q9Y5J7 89 aa8.84□□□□□ -0.99
CDCA3-206ENST00000536241 LINC01619G3V211 115 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 CCL24O00175 119 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 TSPAN15O95858 294 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 IL4P05112 153 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 SEC11BP0C7V7 166 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 ORM2P19652 201 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 SLURP1P55000 103 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 RPEL1Q2QD12 228 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 C12orf54Q6X4T0 127 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 GPHB5Q86YW7 130 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 TMED6Q8WW62 240 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 RAX2Q96IS3 184 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 ZNF747Q9BV97 191 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 PBDC1Q9BVG4 233 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 VSIRQ9H7M9 311 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 DOK5Q9P104 306 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 ATRQ13535 2644 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 ZNF320A2RRD8 509 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 NDUFA4O00483 81 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 HOXD3P31249 432 aaPredicted RBP8.83□□□□□ -1
CDCA3-206ENST00000536241 ELLP55199 621 aaPredicted RBP8.83□□□□□ -1
CDCA3-206ENST00000536241 LYZP61626 148 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 SERF2P84101 59 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 FAM106AQ4KMX7 169 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 ALKAL2Q6UX46 152 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 UNQ9165/PRO28630Q6UXU0 137 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 PATE2Q6UY27 113 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 C3orf56Q8N813 242 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 OR1B1Q8NGR6 318 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 C20orf24Q9BUV8 137 aa8.83□□□□□ -1
CDCA3-206ENST00000536241 ZNF207O43670 478 aaKnown RBP8.82□□□□□ -1
CDCA3-206ENST00000536241 OR5G3P0C626 314 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 ZP3P21754 424 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 PLP1P60201 277 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
CDCA3-206ENST00000536241 USF2Q15853 346 aaPredicted RBP8.82□□□□□ -1
CDCA3-206ENST00000536241 EIF5AL1Q6IS14 154 aaKnown RBP8.82□□□□□ -1
CDCA3-206ENST00000536241 TEX261Q6UWH6 196 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 DLX4Q92988 240 aaPredicted RBP8.82□□□□□ -1
CDCA3-206ENST00000536241 RNF125Q96EQ8 232 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 MDFIQ99750 246 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
CDCA3-206ENST00000536241 FBN1P35555 2871 aaKnown RBP8.81□□□□□ -1
CDCA3-206ENST00000536241 HYPMO75409 117 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 SYNJ2BPP57105 145 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 RAB2AP61019 212 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 ACOT6Q3I5F7 207 aaPredicted RBP8.81□□□□□ -1
CDCA3-206ENST00000536241 TM4SF20Q53R12 229 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 FAM74A1Q5RGS3 127 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 AKR1C8PQ5T2L2 129 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 OR10G4Q8NGN3 311 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 OR10G9Q8NGN4 311 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 OR10G7Q8NGN6 311 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 UHRF2Q96PU4 802 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 KCNIP2Q9NS61 270 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 RPRMQ9NS64 109 aa8.81□□□□□ -1
CDCA3-206ENST00000536241 MRPL27Q9P0M9 148 aaKnown RBP8.81□□□□□ -1
CDCA3-206ENST00000536241 COX7A2P2O60397 106 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 M6PRP20645 277 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 MYCNOSP40205 109 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 IFITM2Q01629 132 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 FHL3Q13643 280 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 ZNF680Q8NEM1 530 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 PHYHIPLQ96FC7 376 aa8.8□□□□□ -1
CDCA3-206ENST00000536241 SEPSECSQ9HD40 501 aaKnown RBP8.8□□□□□ -1
CDCA3-206ENST00000536241 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
CDCA3-206ENST00000536241 IGHV3-49A0A0A0MS15 119 aa8.79□□□□□ -1
CDCA3-206ENST00000536241 LGALS9O00182 355 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms