RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 MRGPRG-AS1Q2M3A8 158 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 TMEM177Q53S58 311 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 SPRNQ5BIV9 151 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 C1orf185Q5T7R7 199 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 C6orf15Q6UXA7 325 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-215ENST00000536145 SLC25A48Q6ZT89 311 aaKnown RBP5.55□□□□□ -1.52
CPSF7-215ENST00000536145 ZNF833PQ6ZTB9 187 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 Q86TA4 180 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 ZCCHC24Q8N2G6 241 aaKnown RBP5.55□□□□□ -1.52
CPSF7-215ENST00000536145 C1orf162Q8NEQ5 155 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-215ENST00000536145 STXBP6Q8NFX7 210 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 OR10W1Q8NGF6 305 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 OR4X2Q8NGF9 303 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 OR10AG1Q8NH19 301 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 VSTM2AQ8TAG5 236 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 TMEM167AQ8TBQ9 72 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 PERPQ96FX8 193 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 HINT2Q9BX68 163 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 RAB9BQ9NP90 201 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 PILRBQ9UKJ0 227 aa5.55□□□□□ -1.52
CPSF7-215ENST00000536145 SPTBN5Q9NRC6 3674 aaKnown RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PPIAL4EA0A075B759 164 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 IGHV3OR15-7A0A075B7D8 119 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PPIAL4CA0A0B4J2A2 164 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 A0A0G2JLM5 398 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 A0A1B0GW15 77 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 E7EUB6 86 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 H3BUT2 72 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 KLK10O43240 276 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 TIMM8AO60220 97 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 P01737 135 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 IGHV3-13P01766 116 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 IGHV3-7P01780 117 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 CECR9P0C854 216 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PPIAL4FP0DN26 164 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 CXCL12P48061 93 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 ZNF137PP52743 207 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 MZT1Q08AG7 82 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 TMEM164Q5U3C3 297 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 ABHD17BQ5VST6 288 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PEAR1Q5VY43 1037 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PMS2CLQ68D20 193 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 ZNF493Q6ZR52 646 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 Q71RC1 249 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 BHLHA15Q7RTS1 189 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PDPNQ86YL7 162 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 RPRMLQ8N4K4 120 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 OR2Z1Q8NG97 314 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 OR4A5Q8NH83 315 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PHLDA1Q8WV24 401 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 TMEM190Q8WZ59 177 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 NPIPB3Q92617 1050 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 TNFRSF14Q92956 283 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 RITA1Q96K30 269 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 C18orf15Q96N68 181 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 TRGV9Q99603 122 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 PLSCR4Q9NRQ2 329 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 JKAMPQ9P055 326 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 RPUSD1Q9UJJ7 312 aaKnown RBP5.54□□□□□ -1.52
CPSF7-215ENST00000536145 SIT1Q9Y3P8 196 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 CHD9Q3L8U1 2897 aa5.54□□□□□ -1.52
CPSF7-215ENST00000536145 SDK2Q58EX2 2172 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 TRANK1O15050 2925 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 A1L4Q6 167 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 LINC01546A6NGU7 62 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 VSTM5A8MXK1 200 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 CHEK1O14757 476 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 IGLV2-23P01705 113 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 IGKV1-16P04430 117 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 CD46P15529 392 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 ACP1P24666 158 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 CSN1S1P47710 185 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 UQCRFS1P47985 274 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 ERHP84090 104 aaKnown RBP5.53□□□□□ -1.52
CPSF7-215ENST00000536145 WT1-ASQ06250 92 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 LOXL1Q08397 574 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-215ENST00000536145 RIGQ13278 110 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 SAMD13Q5VXD3 122 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 FOXI2Q6ZQN5 318 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 Q6ZT83 130 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 ZADH2Q8N4Q0 377 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 FAM169BQ8N8A8 192 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 ZNRF1Q8ND25 227 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-215ENST00000536145 GAFA1Q96PS6 74 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 PSMG3-AS1Q96PY0 264 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 Q9H3A6 140 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 ZNF71Q9NQZ8 489 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-215ENST00000536145 OTORQ9NRC9 128 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 SIGLEC8Q9NYZ4 499 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 TMEM14CQ9P0S9 112 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 HIGD1BQ9P298 99 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 SPCS1Q9Y6A9 102 aa5.53□□□□□ -1.52
CPSF7-215ENST00000536145 ASCC3Q8N3C0 2202 aaKnown RBP5.53□□□□□ -1.52
CPSF7-215ENST00000536145 TRGV5A0A0B4J1U4 118 aa5.52□□□□□ -1.53
CPSF7-215ENST00000536145 IGHV1-18A0A0C4DH31 117 aa5.52□□□□□ -1.53
CPSF7-215ENST00000536145 A0A1B0GUT8 65 aa5.52□□□□□ -1.53
CPSF7-215ENST00000536145 SNAI2O43623 268 aa5.52□□□□□ -1.53
CPSF7-215ENST00000536145 LYZL6O75951 148 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms