RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 FAM231CP0DMU5 169 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 AARDQ4LEZ3 155 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 OR8G2PQ6IF36 304 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 Q6ZRM9 215 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 Q8NAQ8 132 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 GLMPQ8WWB7 406 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 LINC00052Q96N35 136 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 RTBDNQ9BSG5 229 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 NDUFAF3Q9BU61 184 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 XCL2Q9UBD3 114 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 GPR132Q9UNW8 380 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 IGHV4-4A0A075B6R2 117 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 FABP12A6NFH5 140 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 FAM90A26D6RGX4 464 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 IFNA21P01568 189 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 PSG1P11464 419 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 GPX4P36969 197 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 NKX2-1P43699 371 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 LYZP61626 148 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 SPATA31B1PQ5VZV4 182 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 S100A7AQ86SG5 101 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 UBE2DNLQ8IWF7 75 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 OR8I2Q8N0Y5 310 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 CIB3Q96Q77 187 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 RNF126Q9BV68 326 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 NAA50Q9GZZ1 169 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 MRPL36Q9P0J6 103 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 GOLT1BQ9Y3E0 138 aa9.63□□□□□ -0.87
CLSTN3-205ENST00000535452 IGHV3OR16-12A0A075B7B8 117 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 DUXBA0A1W2PPF3 345 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 CTDSP2O14595 271 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 BUB3O43684 328 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 C4BPBP20851 252 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 INPP1P49441 399 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 MEOX2P50222 304 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 USF2Q15853 346 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 NMSQ5H8A3 153 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 Q6ZTC4 211 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 TMED4Q7Z7H5 227 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 OR4B1Q8NGF8 309 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 TMEM208Q9BTX3 173 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 U3KQE9 123 aa9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-205ENST00000535452 ANKRD20A5PA0PJZ0 165 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 VAMP1P23763 118 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 S100A5P33763 92 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 GALR1P47211 349 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 PSMB3P49720 205 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 EMP1P54849 157 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 GGNBP1Q5YKI7 109 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 LINC00336Q6ZUF6 198 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 TOMM5Q8N4H5 51 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 LHFPL5Q8TAF8 219 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 RBKSQ9H477 322 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 HSPB7Q9UBY9 170 aa9.61□□□□□ -0.87
CLSTN3-205ENST00000535452 H3BMM0 161 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 WRBO00258 174 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 TMBIM6P55061 237 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 C16orf92Q96LL3 132 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 MIXL1Q9H2W2 232 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 RPRMQ9NS64 109 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 APLNQ9ULZ1 77 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 RFNGQ9Y644 331 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
CLSTN3-205ENST00000535452 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 HBE1P02100 147 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 AMBPP02760 352 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 SPCS2Q15005 226 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 PYDC2Q56P42 97 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 TMEM128Q5BJH2 165 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 SOHLH1Q5JUK2 328 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 LYZL2Q7Z4W2 148 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 BPIFCQ8NFQ6 507 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 MCFD2Q8NI22 146 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 RNF24Q9Y225 148 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 X6R8D5 127 aa9.59□□□□□ -0.87
CLSTN3-205ENST00000535452 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 ISLRO14498 428 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 AKR1C1Q04828 323 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 FAM210BQ96KR6 192 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 GPR82Q96P67 336 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 NEU1Q99519 415 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 SLC25A21Q9BQT8 299 aaPredicted RBP9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms