RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GNB4Q9HAV0 340 aa6.65□□□□□ -1.34
SFSWAP-202ENST00000535202 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.65□□□□□ -1.34
SFSWAP-202ENST00000535202 SLC2A9Q9NRM0 540 aa6.65□□□□□ -1.34
SFSWAP-202ENST00000535202 RNF150Q9ULK6 438 aa6.65□□□□□ -1.34
SFSWAP-202ENST00000535202 IGKV1-6A0A0C4DH72 117 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 F6UZH7 168 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 PITX3O75364 302 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 IGLV1-40P01703 118 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 PFN1P07737 140 aaKnown RBP6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 ESDP10768 282 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 MC5RP33032 325 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 RAB9AP51151 201 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 LINC00205P59089 165 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 S100A10P60903 97 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 GNB1P62873 340 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 CX3CL1P78423 397 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 CD69Q07108 199 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 FHL3Q13643 280 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 ARL6IP1Q15041 203 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 IAH1Q2TAA2 248 aaPredicted RBP6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 ACTL10Q5JWF8 245 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF491Q8N8L2 437 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 LRTM2Q8N967 370 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 OR4B1Q8NGF8 309 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 OR5AN1Q8NGI8 311 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 OR1N2Q8NGR9 330 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 UBE2E2Q96LR5 201 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 PRR25Q96S07 402 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 TP53RKQ96S44 253 aa6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 RTBDNQ9BSG5 229 aaPredicted RBP6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 FAM103A1Q9BTL3 118 aaKnown RBP6.64□□□□□ -1.35
SFSWAP-202ENST00000535202 M0R1X1 148 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 FCN1O00602 326 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 SOX15O60248 233 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 RAMP3O60896 148 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 SCGB1D1O95968 90 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 CA2P00918 260 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 APOA2P02652 100 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 GNB3P16520 340 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 CEBPGP53567 150 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 RPS16P62249 146 aaKnown RBP6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 VAMP2P63027 116 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 PSG5Q15238 335 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 ASPHD1Q5U4P2 390 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 UNQ5815/PRO19632Q6UWF5 114 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF705AQ6ZN79 300 aaPredicted RBP6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 PDPNQ86YL7 162 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 CYB561D1Q8N8Q1 229 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 FAM213BQ8TBF2 198 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 RNF5Q99942 180 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 B9D2Q9BPU9 175 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 OR2D2Q9H210 308 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 SDF2L1Q9HCN8 221 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 SLC45A2Q9UMX9 530 aa6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 C14orf166Q9Y224 244 aaKnown RBP6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 FOXA2Q9Y261 457 aaPredicted RBP6.63□□□□□ -1.35
SFSWAP-202ENST00000535202 TRAV30A0A087WSZ9 112 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 MAP1LC3B2A6NCE7 125 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 SLC25A17O43808 307 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 PROP1O75360 226 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 IGKV1-16P04430 117 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 CTSDP07339 412 aaPredicted RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 HIST1H1DP16402 221 aaKnown RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 CRIP2P52943 208 aaPredicted RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 RUNX1Q01196 453 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 TMEM267Q0VDI3 215 aaPredicted RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 ARFRP1Q13795 201 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 PRSS8Q16651 343 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 C19orf54Q5BKX5 351 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 FAM90A2PQ658T7 463 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 TCF24Q7RTU0 167 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 PPP1R27Q86WC6 154 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 TCTEX1D1Q8N7M0 179 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF738Q8NE65 137 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 ARPC1AQ92747 370 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 FLYWCH2Q96CP2 140 aaKnown RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 RARRES2Q99969 163 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 ALKBH7Q9BT30 221 aaPredicted RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 MAP1LC3BQ9GZQ8 125 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 CSTL1Q9H114 145 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 TPSG1Q9NRR2 321 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 SLC35D1Q9NTN3 355 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 FUT9Q9Y231 359 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 RBM7Q9Y580 266 aaKnown RBP6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 URGCP-MRPS24S4R325 110 aa6.62□□□□□ -1.35
SFSWAP-202ENST00000535202 PIGBOS1A0A0B4J2F0 54 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 PRSS47A8MTI9 375 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 OVOL1O14753 267 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 CCL25O15444 150 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 HRASP01112 189 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 IFNA1P01562 189 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 IGHV3-11P01762 117 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 LGALS1P09382 135 aaKnown RBP6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 EGR2P11161 476 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms