RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CSN1S1P47710 185 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 MRPS36P82909 103 aaKnown RBP4.16□□□□□ -1.74
SNHG1-201ENST00000535076 VGLL4Q14135 290 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 FAM120AOSQ5T036 256 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 AMN1Q8IY45 258 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 OR5AS1Q8N127 324 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 CIARTQ8N365 385 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-201ENST00000535076 RYBPQ8N488 228 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-201ENST00000535076 OR2T6Q8NHC8 308 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 IL1F10Q8WWZ1 152 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 TMEM158Q8WZ71 300 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 DNAJA3Q96EY1 480 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 ZBTB45Q96K62 511 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-201ENST00000535076 SHANK2-AS3Q9BTD1 123 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 ZNF442Q9H7R0 627 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 NHSQ6T4R5 1651 aa4.16□□□□□ -1.74
SNHG1-201ENST00000535076 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 TRAV26-2A0A0B4J265 109 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 CTXND1A0A1B0GTU2 59 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 RBAKDNA6NC62 111 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 LILRA5A6NI73 299 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 CRYM-AS1A6NIL9 109 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 C2CD4DB7Z1M9 353 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 ATOX1O00244 68 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 STC2O76061 302 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 IGF1P05019 195 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 AQP1P29972 269 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 RPL30P62888 115 aaKnown RBP4.15□□□□□ -1.75
SNHG1-201ENST00000535076 FAM27E3Q08E93 113 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 VMA21Q3ZAQ7 101 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 FAM78AQ5JUQ0 283 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 C1orf100Q5SVJ3 147 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 FAM201AQ5SY85 155 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 C22orf39Q6P5X5 142 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 FAM57AQ8TBR7 257 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 UBE2E3Q969T4 207 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
SNHG1-201ENST00000535076 DEFB118Q96PH6 123 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 MGST2Q99735 147 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 PILRAQ9UKJ1 303 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
SNHG1-201ENST00000535076 FANCMQ8IYD8 2048 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 BRWD3Q6RI45 1802 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 TRAV2A0A0B4J234 112 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 IZUMO1RA6ND01 250 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 M0R1B8 84 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 CST7O76096 145 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 IGKCP01834 107 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 GYPBP06028 91 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 COX6A1P12074 109 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 FKBP2P26885 142 aaKnown RBP4.14□□□□□ -1.75
SNHG1-201ENST00000535076 RPL34P49207 117 aaKnown RBP4.14□□□□□ -1.75
SNHG1-201ENST00000535076 DSCR4P56555 118 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-201ENST00000535076 FXYD6P3P58550 94 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 QRFPP83859 136 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 ARL16Q0P5N6 197 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 TRIP6Q15654 476 aaKnown RBP4.14□□□□□ -1.75
SNHG1-201ENST00000535076 C12orf74Q32Q52 190 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 LGALS9BQ3B8N2 356 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 FKBP1CQ5VVH2 108 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 LGALS9CQ6DKI2 356 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 DGAT2L6Q6ZPD8 337 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 ATP5L2Q7Z4Y8 100 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 TRAPPC6BQ86SZ2 158 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 GTSCR1Q86UQ5 136 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 PRR15Q8IV56 129 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 MMD2Q8IY49 270 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 VKORC1L1Q8N0U8 176 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 FAM19A2Q8N3H0 131 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 TMEM252Q8N6L7 170 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 C18orf12Q96KH6 178 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 ODF3Q96PU9 254 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 SLC25A2Q9BXI2 301 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 AAMDCQ9H7C9 122 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 ZNF286AQ9HBT8 521 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 IL36RNQ9UBH0 155 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 CKLFQ9UBR5 152 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 LSM7Q9UK45 103 aaKnown RBP4.14□□□□□ -1.75
SNHG1-201ENST00000535076 VWA8A3KMH1 1905 aa4.14□□□□□ -1.75
SNHG1-201ENST00000535076 NLRC5Q86WI3 1866 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 A0A0J9YW62 118 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 TRBV7-6A0A0J9YX20 115 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 A0A1W2PPK0 400 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 TCRBV4S1A1TA0A5B7 111 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 TMEM150CB9EJG8 249 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 NDUFB2O95178 105 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 C1orf105O95561 183 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 CD7P09564 240 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 ASAH2BP0C7U1 165 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 LIFP15018 202 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 HOXD3P31249 432 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-201ENST00000535076 CLDN17P56750 224 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 UBE2D3P61077 147 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 UBE2D2P62837 147 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 FKBP1BP68106 108 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 HBG1P69891 147 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 HBG2P69892 147 aa4.13□□□□□ -1.75
SNHG1-201ENST00000535076 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms