RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TMEM235A6NFC5 223 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 OR4C45A6NMZ5 311 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 H3BQ15 152 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 CLDN34H7C241 214 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 K7EPK0 472 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 K7ERU9 68 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 MPDU1O75352 247 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 TRAPPC6AO75865 159 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 RCBTB2O95199 551 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 SOX14O95416 240 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 CPSF4O95639 269 aaKnown RBP2.45□□□□□ -2.02
USP48-215ENST00000534705 OPN1SWP03999 348 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 WNT2P09544 360 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 IGLC2P0DOY2 106 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 IGLC3P0DOY3 106 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 ZNF17P17021 662 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 ZNF19P17023 458 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 CD34P28906 385 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 BIDP55957 195 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 NDPQ00604 133 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 GGTLC2Q14390 218 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 ARL6IP1Q15041 203 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 TNXAQ16473 311 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 LRRC10Q5BKY1 277 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 ACTL10Q5JWF8 245 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 RPL7L1Q6DKI1 246 aaKnown RBP2.45□□□□□ -2.02
USP48-215ENST00000534705 UFSP1Q6NVU6 142 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 MBOAT2Q6ZWT7 520 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 NEGR1Q7Z3B1 354 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 FAM220AQ7Z4H9 259 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 LYPD6Q86Y78 171 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 PNKDQ8N490 385 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 FAM71E2Q8N5Q1 922 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 CCDC71LQ8N9Z2 235 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 CYB561A3Q8NBI2 242 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 SLC26A10Q8NG04 563 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 OR5B3Q8NH48 314 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 SYNPRQ8TBG9 265 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 RAB8BQ92930 207 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 MAL2Q969L2 176 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 SMIM19Q96E16 107 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 TVP23CQ96ET8 276 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 WFDC6Q9BQY6 131 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 AGMATQ9BSE5 352 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 PBDC1Q9BVG4 233 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 SRXN1Q9BYN0 137 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 C11orf1Q9H5F2 150 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 RETNQ9HD89 108 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 KCNJ16Q9NPI9 418 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 FKBP11Q9NYL4 201 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 Q9UF83 564 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 RAB22AQ9UL26 194 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 ANGPT4Q9Y264 503 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 V9GY05 133 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 TLN2Q9Y4G6 2542 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 IGHV2-26A0A0B4J1V2 119 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 IGLC7A0M8Q6 106 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ZNF727A8MUV8 499 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 E9PLD3 99 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 H3BN98 237 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 H7BYZ3 331 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 M0R036 132 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 MRPS12O15235 138 aaKnown RBP2.44□□□□□ -2.02
USP48-215ENST00000534705 BRI3O95415 125 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 OR5G3P0C626 314 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 PET100P0DJ07 73 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 SMIM17P0DL12 118 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 LOXP28300 417 aaPredicted RBP2.44□□□□□ -2.02
USP48-215ENST00000534705 PPOXP50336 477 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 GPM6AP51674 278 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 FXYD6P3P58550 94 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 PAFAH1B2P68402 229 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 HIST1H3AP68431 136 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 SLC35B1P78383 322 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 PPP1R1AQ13522 171 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 GABRA6Q16445 453 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ACOT6Q3I5F7 207 aaPredicted RBP2.44□□□□□ -2.02
USP48-215ENST00000534705 TMEM69Q5SWH9 247 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 FAM120AOSQ5T036 256 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ARL9Q6T311 187 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 TOMM20LQ6UXN7 152 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 HMGN2P46Q86SG4 172 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 NRMQ8IXM6 262 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 C1orf174Q8IYL3 243 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ZIC4Q8N9L1 334 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 OR4B1Q8NGF8 309 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 OR51G1Q8NGK1 321 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 OR10D3Q8NH80 312 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 FNDC9Q8TBE3 224 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ZNF502Q8TBZ5 544 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 FGGYQ96C11 551 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 STARD4Q96DR4 205 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ZMYND19Q96E35 227 aaPredicted RBP2.44□□□□□ -2.02
USP48-215ENST00000534705 C2orf50Q96LR7 162 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 OXGR1Q96P68 337 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 DERL3Q96Q80 235 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 MCHR1Q99705 422 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 ARHGDIGQ99819 225 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 HCAR1Q9BXC0 346 aa2.44□□□□□ -2.02
USP48-215ENST00000534705 CST11Q9H112 138 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms