RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 OR9G4Q8NGQ1 327 aa15.55■□□□□ 0.08
SMPD1-210ENST00000534405 PLPPR2Q96GM1 343 aa15.55■□□□□ 0.08
SMPD1-210ENST00000534405 DUSP13Q9UII6 198 aa15.55■□□□□ 0.08
SMPD1-210ENST00000534405 CACNA1HO95180 2353 aa15.55■□□□□ 0.08
SMPD1-210ENST00000534405 GGTLC3B5MD39 225 aa15.55■□□□□ 0.08
SMPD1-210ENST00000534405 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.55■□□□□ 0.08
SMPD1-210ENST00000534405 SNRNP40Q96DI7 357 aaKnown RBP15.55■□□□□ 0.08
SMPD1-210ENST00000534405 IGHV1-18A0A0C4DH31 117 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 PROP1O75360 226 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 MSMPQ1L6U9 139 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 OR4X2Q8NGF9 303 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 VGLL1Q99990 258 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 VWC2LB2RUY7 222 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 C15orf65H3BRN8 121 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 EDDM3AQ14507 147 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 MIR17HGQ75NE6 70 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 TAAR6Q96RI8 345 aa15.54■□□□□ 0.08
SMPD1-210ENST00000534405 A1L4Q6 167 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 H0Y8G0 127 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 IGLV1-44P01699 117 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 FOXA3P55318 350 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-210ENST00000534405 C1orf162Q8NEQ5 155 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-210ENST00000534405 HIGD1CA8MV81 97 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 F8W1H4 67 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 IGHV3-7P01780 117 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 TEPPQ6URK8 271 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 ABHD17AQ96GS6 310 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 ADTRPQ96IZ2 230 aa15.53■□□□□ 0.08
SMPD1-210ENST00000534405 SPAG8Q99932 426 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-210ENST00000534405 CADP27708 2225 aa15.52■□□□□ 0.08
SMPD1-210ENST00000534405 PRR33A8MZF0 331 aa15.52■□□□□ 0.08
SMPD1-210ENST00000534405 IGFL2Q6UWQ7 119 aa15.52■□□□□ 0.08
SMPD1-210ENST00000534405 SIGLEC8Q9NYZ4 499 aa15.52■□□□□ 0.08
SMPD1-210ENST00000534405 DKK4Q9UBT3 224 aa15.52■□□□□ 0.08
SMPD1-210ENST00000534405 HBBP68871 147 aa15.52■□□□□ 0.07
SMPD1-210ENST00000534405 SPRNQ5BIV9 151 aa15.52■□□□□ 0.07
SMPD1-210ENST00000534405 GCSAMQ8N6F7 178 aa15.52■□□□□ 0.07
SMPD1-210ENST00000534405 JPT1Q9UK76 154 aa15.52■□□□□ 0.07
SMPD1-210ENST00000534405 EP300Q09472 2414 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-210ENST00000534405 SMAD7O15105 426 aaKnown RBP15.51■□□□□ 0.07
SMPD1-210ENST00000534405 FCGR2BP31994 310 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRDX2P32119 198 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 ASPHD1Q5U4P2 390 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 MBNL2Q5VZF2 373 aaKnown RBP15.51■□□□□ 0.07
SMPD1-210ENST00000534405 ZNF418Q8TF45 676 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-210ENST00000534405 ZNF503Q96F45 646 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 ZNF71Q9NQZ8 489 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-210ENST00000534405 IGKV1D-17A0A075B6S4 117 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRR20EP86478 221 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRR20CP86479 221 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRR20DP86480 221 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRR20BP86481 221 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRR20AP86496 221 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 PRAMEF5Q5TYX0 476 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 GCM1Q9NP62 436 aa15.51■□□□□ 0.07
SMPD1-210ENST00000534405 SMIM13P0DJ93 91 aa15.5■□□□□ 0.07
SMPD1-210ENST00000534405 DEFB124Q8NES8 71 aa15.5■□□□□ 0.07
SMPD1-210ENST00000534405 HSD17B10Q99714 261 aaKnown RBP15.5■□□□□ 0.07
SMPD1-210ENST00000534405 COL25A1Q9BXS0 654 aaPredicted RBP15.5■□□□□ 0.07
SMPD1-210ENST00000534405 HEYLQ9NQ87 328 aaPredicted RBP15.5■□□□□ 0.07
SMPD1-210ENST00000534405 HCFC1P51610 2035 aa15.5■□□□□ 0.07
SMPD1-210ENST00000534405 IGHV3-13P01766 116 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 VDAC2P45880 294 aaPredicted RBP15.49■□□□□ 0.07
SMPD1-210ENST00000534405 RTL8BQ17RB0 113 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 SEM1Q6ZVN7 128 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 Q8TCH9 128 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 BOD1L1Q8NFC6 3051 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 TRAV17A0A0B4J275 112 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 SPINT2O43291 252 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 CRYGCP07315 174 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 DUTP33316 252 aaKnown RBP15.49■□□□□ 0.07
SMPD1-210ENST00000534405 TRAT1Q6PIZ9 186 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 SHISA2Q6UWI4 295 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 PIP4P1Q86T03 277 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 NDFIP1Q9BT67 221 aa15.49■□□□□ 0.07
SMPD1-210ENST00000534405 IGHV3OR15-7A0A075B7D8 119 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 UTF1Q5T230 341 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 PLEKHA3Q9HB20 300 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 FCGR3BO75015 233 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 WFDC2Q14508 124 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 ZNF747Q9BV97 191 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 C19orf24Q9BVV8 132 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 FAM234AQ9H0X4 552 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 INSIG2Q9Y5U4 225 aa15.48■□□□□ 0.07
SMPD1-210ENST00000534405 OTOGLQ3ZCN5 2332 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 GFRA3O60609 400 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 ACTL6BO94805 426 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 VKORC1L1Q8N0U8 176 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 GTSF1Q8WW33 167 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 PSG8Q9UQ74 426 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 SRRM5B3KS81 715 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 NCR2O95944 276 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 GPR12P47775 334 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 ZNF134P52741 427 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 RPL39P5Q59GN2 51 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 FAM90A1Q86YD7 464 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 GNG12Q9UBI6 72 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 PROCRQ9UNN8 238 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 SLC25A15Q9Y619 301 aa15.47■□□□□ 0.07
SMPD1-210ENST00000534405 FBLL1A6NHQ2 334 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms