RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	RAB40C	Q96S21	281 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	SPATA25	Q9BR10	227 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382		U3KQE9	123 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	C5orf51	A6NDU8	294 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	FAM25E	A8MYX2	175 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	MBP	P02686	304 aa	Predicted RBP	10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	FABP1	P07148	127 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	P2RY1	P47900	373 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	CMC4	P56277	68 aa	Predicted RBP	10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	TAS2R30	P59541	319 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	RPL11	P62913	178 aa	Known RBP	10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	ZNF90	Q03938	601 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	THAP8	Q8NA92	274 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	GRAMD2B	Q96HH9	432 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	TRGV9	Q99603	122 aa		10.8	□□□□□ -0.68
CTSB-231	ENST00000534382	IGKV1OR2-108	A0A075B7D4	117 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	TRAV2	A0A0B4J234	112 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	DNASE2	O00115	360 aa	Predicted RBP	10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	DEFA1	P59665	94 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	DEFA3	P59666	94 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	NRARP	Q7Z6K4	114 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	WFDC3	Q8IUB2	231 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	RNF125	Q96EQ8	232 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	C2orf50	Q96LR7	162 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	GGTLC1	Q9BX51	225 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	MS4A6A	Q9H2W1	248 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	GPN1	Q9HCN4	374 aa	Predicted RBP	10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	RABAC1	Q9UI14	185 aa		10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	RCL1	Q9Y2P8	373 aa	Known RBP	10.79	□□□□□ -0.68
CTSB-231	ENST00000534382	PMS2P5	A8MQ11	134 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	SNRPGP15	A8MWD9	76 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	TSC22D2	O75157	780 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	OR8G2P	Q6IF36	304 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	C16orf54	Q6UWD8	224 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	TMEM14EP	Q6UXP3	125 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	ACOT7L	Q6ZUV0	252 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	GLMP	Q8WWB7	406 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	PBDC1	Q9BVG4	233 aa		10.78	□□□□□ -0.68
CTSB-231	ENST00000534382	C7orf66	A4D0T2	115 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	INMT-MINDY4	F8WBC2	141 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	BUB3	O43684	328 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	METTL15P1	P0C7V9	234 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	EIF2B2	P49770	351 aa	Known RBP	10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	AP2S1	P53680	142 aa	Predicted RBP	10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	AKR1C1	Q04828	323 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	OR2F1	Q13607	317 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	GSG1L	Q6UXU4	331 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	TMEM144	Q7Z5S9	345 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	STXBP6	Q8NFX7	210 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	OR10P1	Q8NGE3	313 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	PFDN2	Q9UHV9	154 aa		10.77	□□□□□ -0.69
CTSB-231	ENST00000534382	STAB2	Q8WWQ8	2551 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	HELT	A6NFD8	242 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382		K7EPK0	472 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382		L7N2F9	121 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	PRAF2	O60831	178 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	CCNK	O75909	580 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	CFD	P00746	253 aa	Predicted RBP	10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	NUP62	P37198	522 aa	Predicted RBP	10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	LYZ	P61626	148 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	VAMP2	P63027	116 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	DLK1	P80370	383 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	IL15RA	Q13261	267 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	APRG1	Q8IVJ8	170 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	MARVELD1	Q9BSK0	173 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	MAP6D1	Q9H9H5	199 aa		10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	LSM5	Q9Y4Y9	91 aa	Known RBP	10.76	□□□□□ -0.69
CTSB-231	ENST00000534382	SMCO3	A2RU48	225 aa		10.75	□□□□□ -0.69
CTSB-231	ENST00000534382	FNDC10	F2Z333	226 aa		10.75	□□□□□ -0.69
CTSB-231	ENST00000534382		K7EQG2	157 aa		10.75	□□□□□ -0.69
CTSB-231	ENST00000534382	RETN	Q9HD89	108 aa		10.75	□□□□□ -0.69
CTSB-231	ENST00000534382	KIR2DL5B	A0A0G2JN68	375 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	KIR2DL5B	A0A0G2JPC4	375 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	APOC4	P55056	127 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	DEFB131A	P59861	70 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	RRAS2	P62070	204 aa	Predicted RBP	10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	ZNF124	Q15973	351 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	KIR2DL5A	Q8N109	375 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	FAM24B	Q8N5W8	94 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	BPIFC	Q8NFQ6	507 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	KIR2DL5B	Q8NHK3	375 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	DCANP1	Q8TF63	244 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	NPVF	Q9HCQ7	196 aa		10.74	□□□□□ -0.69
CTSB-231	ENST00000534382	TENM3	Q9P273	2699 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	UBE2C	O00762	179 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	RPL35A	P18077	110 aa	Known RBP	10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	PVALB	P20472	110 aa	Predicted RBP	10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	GATA2	P23769	480 aa	Predicted RBP	10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	BCAP31	P51572	246 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	S100A10	P60903	97 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	ARL16	Q0P5N6	197 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	RAB32	Q13637	225 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	C1orf194	Q5T5A4	169 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	SIGLEC15	Q6ZMC9	328 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	CYP2G1P	Q6ZSU1	146 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	STPG3	Q8N7X2	389 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	GGACT	Q9BVM4	153 aa		10.73	□□□□□ -0.69
CTSB-231	ENST00000534382	C11orf1	Q9H5F2	150 aa		10.73	□□□□□ -0.69

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