RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 HRASP01112 189 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 KRASP01116 189 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR5AL1P0C617 328 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 IGKV1-13P0DP09 117 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 NTF3P20783 257 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 RPL12P30050 165 aaKnown RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 G6PCP35575 357 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 TAS2R46P59540 309 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 FOXF1Q12946 379 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 CATR1Q13166 79 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ITPR3Q14573 2671 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 GLYATL3Q5SZD4 288 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 C2orf66Q6UXQ4 117 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 WDFY4Q6ZS81 3184 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 MRPL55Q7Z7F7 128 aaKnown RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 LINC00471Q8N535 108 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZIC4Q8N9L1 334 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR2M3Q8NG83 312 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR10P1Q8NGE3 313 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR8S1Q8NH09 359 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 PPP1R1CQ8WVI7 109 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR5P3Q8WZ94 311 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 MYO18AQ92614 2054 aaKnown RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 AQP10Q96PS8 301 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 PRORYQ9H606 182 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 RERGLQ9H628 205 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 RPRMQ9NS64 109 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 CISHQ9NSE2 258 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 PCNX3Q9H6A9 2034 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 DUXBA0A1W2PPF3 345 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 ARRDC5A6NEK1 342 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 OR4C46A6NHA9 309 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 C9JAW5 83 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 C17orf112F2Z3M2 114 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 F8W1H4 67 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 H0YJW9 148 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 TMEM250H0YL14 139 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 APOC2P02655 101 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 LINC00869P0C866 280 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 RPL7P18124 248 aaKnown RBP2.62□□□□□ -1.99
CSMD3-210ENST00000534172 DRD3P35462 400 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 SLC25A1P53007 311 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 CAV3P56539 151 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 PPP1CBP62140 327 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 C11orf71Q6IPW1 123 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 SFXN4Q6P4A7 337 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 C6orf223Q8N319 242 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 OR10D3Q8NH80 312 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 PPTC7Q8NI37 304 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 C1orf147Q96MC9 270 aaPredicted RBP2.62□□□□□ -1.99
CSMD3-210ENST00000534172 OR4C12Q96R67 309 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 KIR2DL4Q99706 377 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 TSSK6Q9BXA6 273 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 PRTFDC1Q9NRG1 225 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 IDI2-AS1Q9NZ38 188 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 CLCF1Q9UBD9 225 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 HIGD1AQ9Y241 93 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 NOP16Q9Y3C1 178 aaKnown RBP2.62□□□□□ -1.99
CSMD3-210ENST00000534172 SMAD5-AS1Q9Y6J3 95 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 HCFC1P51610 2035 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 ABCA2Q9BZC7 2435 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 CFAP46Q8IYW2 2715 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 OR51F1A6NGY5 319 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 CRXO43186 299 aaPredicted RBP2.62□□□□□ -1.99
CSMD3-210ENST00000534172 OR2H2O95918 312 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 CRYBB3P26998 211 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 OR1E2P47887 323 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 SSBP1Q04837 148 aaKnown RBP2.62□□□□□ -1.99
CSMD3-210ENST00000534172 PRR4Q16378 134 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 C4orf26Q17RF5 130 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 MPV17LQ2QL34 196 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 PAGE3Q5JUK9 113 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 SLC25A30Q5SVS4 291 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 Q6Q795 121 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 Q6ZUT4 128 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 ATP6V0E2Q8NHE4 81 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 VSTM2AQ8TAG5 236 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 TMEM230Q96A57 120 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 PMCHL2Q9BQD1 86 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 SPANXDQ9BXN6 97 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 NMES1Q9C002 83 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 WASHC3Q9Y3C0 194 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 MED31Q9Y3C7 131 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 HEBP2Q9Y5Z4 205 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 LINC00312Q9Y6C7 94 aa2.62□□□□□ -1.99
CSMD3-210ENST00000534172 RAI1Q7Z5J4 1906 aaPredicted RBP2.61□□□□□ -1.99
CSMD3-210ENST00000534172 KIF26AQ9ULI4 1882 aaPredicted RBP2.61□□□□□ -1.99
CSMD3-210ENST00000534172 BRWD1Q9NSI6 2320 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 UBR5O95071 2799 aaPredicted RBP2.61□□□□□ -1.99
CSMD3-210ENST00000534172 SIPA1L3O60292 1781 aaPredicted RBP2.61□□□□□ -1.99
CSMD3-210ENST00000534172 IGHV3OR16-13A0A075B7E8 117 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 TRGV10A0A0A0MS01 117 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 OR4C45A6NMZ5 311 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 TBL1XO60907 577 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF286BP0CG31 522 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 FABP2P12104 132 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 SLC25A6P12236 298 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 CDK2P24941 298 aa2.61□□□□□ -1.99
CSMD3-210ENST00000534172 BLVRBP30043 206 aaPredicted RBP2.61□□□□□ -1.99
CSMD3-210ENST00000534172 HSPE1P61604 102 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms