RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 CHST1O43916 411 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 DEDDO75618 318 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 NXPH3O95157 252 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM50AO95807 157 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 IGHV4-59P01825 116 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 OR13C7P0DN81 318 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 HNF1AP20823 631 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 VDAC2P45880 294 aaPredicted RBP4.84□□□□□ -1.63
CMTM1-220ENST00000534143 P2RY1P47900 373 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 RPL8P62917 257 aaKnown RBP4.84□□□□□ -1.63
CMTM1-220ENST00000534143 VAMP2P63027 116 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 LY6EQ16553 131 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 ACOT6Q3I5F7 207 aaPredicted RBP4.84□□□□□ -1.63
CMTM1-220ENST00000534143 KHDC3LQ587J8 217 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 RPL7L1Q6DKI1 246 aaKnown RBP4.84□□□□□ -1.63
CMTM1-220ENST00000534143 DPPA3Q6W0C5 159 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 SSX7Q7RTT5 188 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 C16orf82Q7Z2V1 217 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM219Q86XT9 240 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 SIGLECL1Q8N7X8 197 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 C5orf56Q8N8D9 126 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 OR1L8Q8NGR8 309 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 OR5B3Q8NH48 314 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 FAM213BQ8TBF2 198 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 DTD1Q8TEA8 209 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 SLC25A33Q9BSK2 321 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 MAGT1Q9H0U3 335 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 RBKSQ9H477 322 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 NDUFA4L2Q9NRX3 87 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 OR5AC2Q9NZP5 309 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 KIAA1456Q9P272 454 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 FBXL17Q9UF56 701 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 LSM5Q9Y4Y9 91 aaKnown RBP4.84□□□□□ -1.63
CMTM1-220ENST00000534143 OR51B2Q9Y5P1 312 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 TLN2Q9Y4G6 2542 aa4.84□□□□□ -1.64
CMTM1-220ENST00000534143 IGHV7-81A0A0B4J1V7 117 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 NCBP2LA6PVI3 153 aaKnown RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 A8MWP6 167 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 INS-IGF2F8WCM5 200 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 H3BQ15 152 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 RBMXL2O75526 392 aaKnown RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 SCGB1D2O95969 90 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 CA2P00918 260 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 HLA-DRB1P01911 266 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 HSPB1P04792 205 aaKnown RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 TRGC1P0CF51 173 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 OR10J1P30954 320 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 RPL27AP46776 148 aaKnown RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 COMPP49747 757 aaPredicted RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 CEBPGP53567 150 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 TAS2R30P59541 319 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 CX3CL1P78423 397 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 PRCDQ00LT1 54 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 PLGLAQ15195 96 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 TNXAQ16473 311 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 C10orf55Q5SWW7 151 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF562Q6V9R5 426 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM86BQ8N661 226 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 LYPD6BQ8NI32 183 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 SSMEM1Q8WWF3 244 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 GNPNAT1Q96EK6 184 aaPredicted RBP4.83□□□□□ -1.64
CMTM1-220ENST00000534143 RAB40CQ96S21 281 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 RASL11BQ9BPW5 248 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 GINS3Q9BRX5 216 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 COMMD5Q9GZQ3 224 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 VAX2Q9UIW0 290 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 MOB4Q9Y3A3 225 aa4.83□□□□□ -1.64
CMTM1-220ENST00000534143 A0A1W2PPQ1 181 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 IGLC7A0M8Q6 106 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 MSGN1A6NI15 193 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 LINC01548A6NM66 108 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 PMS2P5A8MQ11 134 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 CEBPZOSA8MTT3 80 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 TEX22C9J3V5 150 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 INAFM1C9JVW0 142 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 SSSCA1O60232 199 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 IAPPP10997 89 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 SRD5A1P18405 259 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BCP62807 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 RPL19P84098 196 aaKnown RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 NDPQ00604 133 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 FXYD3Q14802 87 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST2H2BEQ16778 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 BSXQ3C1V8 233 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 SPINK9Q5DT21 86 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 PDZD11Q5EBL8 140 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 ASPHD1Q5U4P2 390 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 PVRIGQ6DKI7 326 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 SLC25A24Q6NUK1 477 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms