RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	CIB3	Q96Q77	187 aa	Predicted RBP	12.99	□□□□□ -0.33
BBS1-223	ENST00000533644	C7orf50	Q9BRJ6	194 aa	Known RBP	12.99	□□□□□ -0.33
BBS1-223	ENST00000533644	BUB3	O43684	328 aa		12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	SYNGR2	O43760	224 aa		12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	ATF4	P18848	351 aa	Predicted RBP	12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	EIF2B2	P49770	351 aa	Known RBP	12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	DHRS2	Q13268	280 aa		12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	OR51G1	Q8NGK1	321 aa		12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	RNF125	Q96EQ8	232 aa		12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	FLVCR2	Q9UPI3	526 aa		12.98	□□□□□ -0.33
BBS1-223	ENST00000533644	LINC00854	A0A1B0GVQ3	168 aa		12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	ZFP92	A6NM28	416 aa		12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	PRSS46	E5RG02	174 aa		12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	AP2S1	P53680	142 aa	Predicted RBP	12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	RAB11A	P62491	216 aa		12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	GATAD1	Q8WUU5	269 aa		12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	MAGT1	Q9H0U3	335 aa		12.97	□□□□□ -0.33
BBS1-223	ENST00000533644	CENPX	A8MT69	81 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	ADAP1	O75689	374 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	OR4E1	P0C645	316 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	ZNF688	P0C7X2	276 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	ZNF90	Q03938	601 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	OR8G2P	Q6IF36	304 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	COQ8A	Q8NI60	647 aa		12.96	□□□□□ -0.33
BBS1-223	ENST00000533644	IGKV1OR2-108	A0A075B7D4	117 aa		12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	FABP1	P07148	127 aa		12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	ANXA7	P20073	488 aa	Known RBP	12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	NUP62	P37198	522 aa	Predicted RBP	12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	RPP30	P78346	268 aa	Known RBP	12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	ID3	Q02535	119 aa		12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	TRPT1	Q86TN4	253 aa	Known RBP	12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	THAP8	Q8NA92	274 aa		12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	TRGV9	Q99603	122 aa		12.95	□□□□□ -0.34
BBS1-223	ENST00000533644	PLEC	Q15149	4684 aa	Known RBP	12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	WRB	O00258	174 aa		12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	CA1	P00915	261 aa	Predicted RBP	12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	SIGLEC15	Q6ZMC9	328 aa		12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	STH	Q8IWL8	128 aa		12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	SEPSECS	Q9HD40	501 aa	Known RBP	12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	NRN1	Q9NPD7	142 aa		12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	PAIP2B	Q9ULR5	123 aa	Known RBP	12.94	□□□□□ -0.34
BBS1-223	ENST00000533644	PLA2G10	O15496	165 aa		12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	GIG44	P09565	113 aa	Predicted RBP	12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	CNPY1	Q3B7I2	92 aa		12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	C4orf46	Q504U0	113 aa		12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	TMEM217	Q8N7C4	229 aa		12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	OR4D5	Q8NGN0	318 aa		12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	PBDC1	Q9BVG4	233 aa		12.93	□□□□□ -0.34
BBS1-223	ENST00000533644	KNCN	A6PVL3	124 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	SNRPGP15	A8MWD9	76 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644		H3BP45	60 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	JTB	O76095	146 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	IFNA21	P01568	189 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	SPP1	P10451	314 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	POLR2G	P62487	172 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	PSMG4	Q5JS54	123 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	SPANXN5	Q5MJ07	72 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	OR11H2	Q8NH07	326 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	MITD1	Q8WV92	249 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	RARRES2	Q99969	163 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	PFDN2	Q9UHV9	154 aa		12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	STRAP	Q9Y3F4	350 aa	Known RBP	12.92	□□□□□ -0.34
BBS1-223	ENST00000533644	CXorf65	A6NEN9	183 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	LYRM1	O43325	122 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	NKX2-1	P43699	371 aa	Predicted RBP	12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	LYZ	P61626	148 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	OR2F1	Q13607	317 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	TMEM41B	Q5BJD5	291 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	ACTL10	Q5JWF8	245 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	C1orf194	Q5T5A4	169 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	MORN3	Q6PF18	240 aa	Predicted RBP	12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	RAB40C	Q96S21	281 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	C20orf85	Q9H1P6	137 aa		12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	C11orf68	Q9H3H3	251 aa	Known RBP	12.91	□□□□□ -0.34
BBS1-223	ENST00000533644	AGRN	O00468	2067 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	NUPR2	A6NF83	97 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	CFD	P00746	253 aa	Predicted RBP	12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	C4BPB	P20851	252 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	SNRPD3	P62318	126 aa	Known RBP	12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	PMS2P11	Q13670	270 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	LINC00299	Q6ZSB3	139 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	ACOT7L	Q6ZUV0	252 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	FBXL17	Q9UF56	701 aa		12.9	□□□□□ -0.34
BBS1-223	ENST00000533644	SSSCA1	O60232	199 aa		12.89	□□□□□ -0.35
BBS1-223	ENST00000533644	SMIM8	Q96KF7	97 aa		12.89	□□□□□ -0.35
BBS1-223	ENST00000533644	CCDC32	Q9BV29	185 aa		12.89	□□□□□ -0.35
BBS1-223	ENST00000533644	ALMS1	Q8TCU4	4167 aa		12.89	□□□□□ -0.35
BBS1-223	ENST00000533644	PMS2P5	A8MQ11	134 aa		12.88	□□□□□ -0.35
BBS1-223	ENST00000533644	PAX9	P55771	341 aa		12.88	□□□□□ -0.35
BBS1-223	ENST00000533644	IAH1	Q2TAA2	248 aa	Predicted RBP	12.88	□□□□□ -0.35
BBS1-223	ENST00000533644	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.88	□□□□□ -0.35
BBS1-223	ENST00000533644	PSENEN	Q9NZ42	101 aa		12.88	□□□□□ -0.35
BBS1-223	ENST00000533644	SLC45A2	Q9UMX9	530 aa		12.88	□□□□□ -0.35
BBS1-223	ENST00000533644	SOCS3	O14543	225 aa		12.87	□□□□□ -0.35
BBS1-223	ENST00000533644	TCRB	P04435	133 aa		12.87	□□□□□ -0.35
BBS1-223	ENST00000533644	AKR1C1	Q04828	323 aa		12.87	□□□□□ -0.35
BBS1-223	ENST00000533644	TMEM14EP	Q6UXP3	125 aa		12.87	□□□□□ -0.35
BBS1-223	ENST00000533644	TMEM144	Q7Z5S9	345 aa		12.87	□□□□□ -0.35
BBS1-223	ENST00000533644	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms