RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 PITPNC1Q9UKF7 332 aa17.16■□□□□ 0.34
AP004608.1-202ENST00000533390 S4R3C0 116 aa17.16■□□□□ 0.34
AP004608.1-202ENST00000533390 FBN2P35556 2912 aa17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 NDUFB8O95169 186 aa17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 ADIRFQ15847 76 aa17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 PRSS57Q6UWY2 283 aa17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 Q96MF0 132 aa17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 USP9YO00507 2555 aaPredicted RBP17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 CR1P17927 2039 aa17.15■□□□□ 0.34
AP004608.1-202ENST00000533390 SCO2A0A1W2PP80 73 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 A0A1W2PRE2 83 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 OR2C1O95371 312 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 TOMM40O96008 361 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 IGHV4-31P0DP07 118 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 PSMG3-AS1Q96PY0 264 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 ATF4P18848 351 aaPredicted RBP17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 ISOC2Q96AB3 205 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 PRELID1Q9Y255 219 aa17.14■□□□□ 0.33
AP004608.1-202ENST00000533390 A6NDX4 124 aa17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 M0QZK8 103 aa17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 PYYP10082 97 aa17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 YPEL3P61236 119 aaPredicted RBP17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 RPL23P62829 140 aaKnown RBP17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 C9orf152Q5JTZ5 239 aa17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 DOPEY2Q9Y3R5 2298 aa17.13■□□□□ 0.33
AP004608.1-202ENST00000533390 LINC01548A6NM66 108 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 AMY1AP04745 511 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 VN1R17PQ8TDU5 208 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 TXN2Q99757 166 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 VPS13CQ709C8 3753 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 COLCA2A8K830 154 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 G3V318 75 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 KLK9Q2XQG4 91 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 C11orf52Q96A22 123 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 KLK9Q9UKQ9 250 aa17.12■□□□□ 0.33
AP004608.1-202ENST00000533390 Q8WTZ3 238 aa17.11■□□□□ 0.33
AP004608.1-202ENST00000533390 DERL1Q9BUN8 251 aa17.11■□□□□ 0.33
AP004608.1-202ENST00000533390 PTPN13Q12923 2485 aa17.11■□□□□ 0.33
AP004608.1-202ENST00000533390 CXorf65A6NEN9 183 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 FCGR2BP31994 310 aaPredicted RBP17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 SUMO1P63165 101 aaKnown RBP17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 FXYD5Q96DB9 178 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 SLC25A39Q9BZJ4 359 aaPredicted RBP17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 MRPL27Q9P0M9 148 aaKnown RBP17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 TRAV41A0A0B4J266 112 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 IGHV3-23P01764 117 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 IL4P05112 153 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 RHOGP84095 191 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 RNF212Q495C1 297 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 HIST2H2BCQ6DN03 193 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 S100A7AQ86SG5 101 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 RNF125Q96EQ8 232 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 CTDSP1Q9GZU7 261 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 TMEM242Q9NWH2 141 aa17.1■□□□□ 0.33
AP004608.1-202ENST00000533390 CHD6Q8TD26 2715 aa17.09■□□□□ 0.33
AP004608.1-202ENST00000533390 F8W735 103 aaPredicted RBP17.09■□□□□ 0.33
AP004608.1-202ENST00000533390 MT-ND4LP03901 98 aa17.09■□□□□ 0.33
AP004608.1-202ENST00000533390 CRIP2P52943 208 aaPredicted RBP17.09■□□□□ 0.33
AP004608.1-202ENST00000533390 C15orf32Q32M92 178 aa17.09■□□□□ 0.33
AP004608.1-202ENST00000533390 ZNF491Q8N8L2 437 aa17.09■□□□□ 0.33
AP004608.1-202ENST00000533390 TRBV9A0A0B4J1U6 114 aa17.08■□□□□ 0.33
AP004608.1-202ENST00000533390 GGTLC3B5MD39 225 aa17.08■□□□□ 0.33
AP004608.1-202ENST00000533390 CLDN34H7C241 214 aa17.08■□□□□ 0.33
AP004608.1-202ENST00000533390 FAM24BQ8N5W8 94 aa17.08■□□□□ 0.33
AP004608.1-202ENST00000533390 HIST1H2BAQ96A08 127 aa17.08■□□□□ 0.33
AP004608.1-202ENST00000533390 MDFIC2A0A1B0GVS7 189 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 WI2-2373I1.2A0A1W2PRP0 233 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 OR2T8A6NH00 312 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 CRYBB3P26998 211 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 DEFB112Q30KQ8 113 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 KRTAP1-3Q8IUG1 177 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 NECAP1Q8NC96 275 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 POLQO75417 2590 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 LEMD1Q68G75 181 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 CYB5R2Q6BCY4 276 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 GAR1Q9NY12 217 aaKnown RBP17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 CELSR2Q9HCU4 2923 aa17.07■□□□□ 0.32
AP004608.1-202ENST00000533390 IGHG2P01859 326 aa17.06■□□□□ 0.32
AP004608.1-202ENST00000533390 NBEAP1P0C6P0 100 aa17.06■□□□□ 0.32
AP004608.1-202ENST00000533390 LINC01551Q86U37 167 aa17.06■□□□□ 0.32
AP004608.1-202ENST00000533390 BCL6BQ8N143 479 aaPredicted RBP17.06■□□□□ 0.32
AP004608.1-202ENST00000533390 ZNF502Q8TBZ5 544 aa17.06■□□□□ 0.32
AP004608.1-202ENST00000533390 BLNKQ8WV28 456 aa17.06■□□□□ 0.32
AP004608.1-202ENST00000533390 GP9P14770 177 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 ANAPC16Q96DE5 110 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 MS4A10Q96PG2 267 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 SHANK2-AS3Q9BTD1 123 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 HELTA6NFD8 242 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 H3BRN7 92 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 IGF1P05019 195 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 CTSGP08311 255 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 RPL35P42766 123 aaKnown RBP17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 EEF1AKMT3Q96AZ1 226 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 ELOVL1Q9BW60 279 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 TMEM14CQ9P0S9 112 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 LINC00527Q9UJ94 153 aa17.05■□□□□ 0.32
AP004608.1-202ENST00000533390 C9JCJ5 164 aa17.04■□□□□ 0.32
AP004608.1-202ENST00000533390 C19orf54Q5BKX5 351 aa17.04■□□□□ 0.32
AP004608.1-202ENST00000533390 ZNF600Q6ZNG1 722 aa17.04■□□□□ 0.32
AP004608.1-202ENST00000533390 URGCP-MRPS24S4R325 110 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms