RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MARVELD1Q9BSK0 173 aa15.23■□□□□ 0.03
CCS-208ENST00000533244 PRAF2O60831 178 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 DFFBO76075 338 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 HNRNPCP07910 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCS-208ENST00000533244 ZNF90Q03938 601 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 IL15RAQ13261 267 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 ACOT7LQ6ZUV0 252 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 OR51G1Q8NGK1 321 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 C2orf50Q96LR7 162 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 CITED4Q96RK1 184 aa15.22■□□□□ 0.03
CCS-208ENST00000533244 TRAV2A0A0B4J234 112 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 C7orf66A4D0T2 115 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 C5orf51A6NDU8 294 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 SNRPGP15A8MWD9 76 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 INMT-MINDY4F8WBC2 141 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 P2RY1P47900 373 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 RNF125Q96EQ8 232 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
CCS-208ENST00000533244 C11orf1Q9H5F2 150 aa15.21■□□□□ 0.03
CCS-208ENST00000533244 GPN1Q9HCN4 374 aaPredicted RBP15.21■□□□□ 0.03
CCS-208ENST00000533244 FAM25EA8MYX2 175 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 CCNKO75909 580 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 GLMPQ8WWB7 406 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 RCHY1Q96PM5 261 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 MS4A6AQ9H2W1 248 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 ZMAT4Q9H898 229 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 UBQLN2Q9UHD9 624 aa15.2■□□□□ 0.02
CCS-208ENST00000533244 IGKV3-7A0A075B6H7 116 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 K7EPK0 472 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 FABP1P07148 127 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 PAFAH1B2P68402 229 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 OR8G2PQ6IF36 304 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 C16orf54Q6UWD8 224 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 GSG1LQ6UXU4 331 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 GRAMD2BQ96HH9 432 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 RABAC1Q9UI14 185 aa15.19■□□□□ 0.02
CCS-208ENST00000533244 BUB3O43684 328 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 METTL15P1P0C7V9 234 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 TFPI2P48307 235 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 DLK1P80370 383 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 TMEM144Q7Z5S9 345 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 GBGT1Q8N5D6 347 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 SPATA25Q9BR10 227 aa15.18■□□□□ 0.02
CCS-208ENST00000533244 FNDC10F2Z333 226 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 EIF2B2P49770 351 aaKnown RBP15.17■□□□□ 0.02
CCS-208ENST00000533244 CMC4P56277 68 aaPredicted RBP15.17■□□□□ 0.02
CCS-208ENST00000533244 WWC2-AS2Q96NR7 200 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 LSM5Q9Y4Y9 91 aaKnown RBP15.17■□□□□ 0.02
CCS-208ENST00000533244 NBEAL2Q6ZNJ1 2754 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 AKR1C1Q04828 323 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 OR10P1Q8NGE3 313 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 GGTLC1Q9BX51 225 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 MAP6D1Q9H9H5 199 aa15.17■□□□□ 0.02
CCS-208ENST00000533244 LOC102724200A0A096LPH7 203 aaPredicted RBP15.16■□□□□ 0.02
CCS-208ENST00000533244 HELTA6NFD8 242 aa15.16■□□□□ 0.02
CCS-208ENST00000533244 K7EQG2 157 aa15.16■□□□□ 0.02
CCS-208ENST00000533244 CFDP00746 253 aaPredicted RBP15.16■□□□□ 0.02
CCS-208ENST00000533244 NUP62P37198 522 aaPredicted RBP15.16■□□□□ 0.02
CCS-208ENST00000533244 ARL16Q0P5N6 197 aa15.16■□□□□ 0.02
CCS-208ENST00000533244 OR2F1Q13607 317 aa15.16■□□□□ 0.02
CCS-208ENST00000533244 STPG3Q8N7X2 389 aa15.16■□□□□ 0.02
CCS-208ENST00000533244 PBDC1Q9BVG4 233 aa15.16■□□□□ 0.02
CCS-208ENST00000533244 L7N2F9 121 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 LYZP61626 148 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 RPL11P62913 178 aaKnown RBP15.15■□□□□ 0.02
CCS-208ENST00000533244 VAMP2P63027 116 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 RAB32Q13637 225 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 FAM24BQ8N5W8 94 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 DCANP1Q8TF63 244 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 GGACTQ9BVM4 153 aa15.15■□□□□ 0.02
CCS-208ENST00000533244 DNASE2O00115 360 aaPredicted RBP15.14■□□□□ 0.01
CCS-208ENST00000533244 TMEM182Q6ZP80 229 aaPredicted RBP15.14■□□□□ 0.01
CCS-208ENST00000533244 WFDC3Q8IUB2 231 aa15.14■□□□□ 0.01
CCS-208ENST00000533244 APRG1Q8IVJ8 170 aa15.14■□□□□ 0.01
CCS-208ENST00000533244 GOSR2O14653 212 aa15.13■□□□□ 0.01
CCS-208ENST00000533244 AP2S1P53680 142 aaPredicted RBP15.13■□□□□ 0.01
CCS-208ENST00000533244 RRAS2P62070 204 aaPredicted RBP15.13■□□□□ 0.01
CCS-208ENST00000533244 STXBP6Q8NFX7 210 aa15.13■□□□□ 0.01
CCS-208ENST00000533244 NPVFQ9HCQ7 196 aa15.13■□□□□ 0.01
CCS-208ENST00000533244 PFDN2Q9UHV9 154 aa15.13■□□□□ 0.01
CCS-208ENST00000533244 SLC45A2Q9UMX9 530 aa15.13■□□□□ 0.01
CCS-208ENST00000533244 SMCO3A2RU48 225 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 DEDDO75618 318 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 SIX6O95475 246 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 PVALBP20472 110 aaPredicted RBP15.12■□□□□ 0.01
CCS-208ENST00000533244 GATA2P23769 480 aaPredicted RBP15.12■□□□□ 0.01
CCS-208ENST00000533244 S100A10P60903 97 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 ZNF124Q15973 351 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 SIGLEC15Q6ZMC9 328 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 CYP2G1PQ6ZSU1 146 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 BPIFCQ8NFQ6 507 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 NMES1Q9C002 83 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 LYRM2Q9NU23 88 aaPredicted RBP15.12■□□□□ 0.01
CCS-208ENST00000533244 MGAT4CQ9UBM8 478 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 DNAH7Q8WXX0 4024 aa15.12■□□□□ 0.01
CCS-208ENST00000533244 PTTG1O95997 202 aa15.11■□□□□ 0.01
CCS-208ENST00000533244 CAV2P51636 162 aa15.11■□□□□ 0.01
CCS-208ENST00000533244 C1orf194Q5T5A4 169 aa15.11■□□□□ 0.01
CCS-208ENST00000533244 RETNQ9HD89 108 aa15.11■□□□□ 0.01
CCS-208ENST00000533244 KIR2DL5BA0A0G2JN68 375 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms