RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CD5P06127 495 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 CRYBB3P26998 211 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 GPX4P36969 197 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-210ENST00000532935 RAB11AP62491 216 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 CYCSP99999 105 aaKnown RBP11.44□□□□□ -0.58
CPSF1-210ENST00000532935 TCF24Q7RTU0 167 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 Q8WTZ3 238 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 TMEM231Q9H6L2 316 aa11.44□□□□□ -0.58
CPSF1-210ENST00000532935 LOC102724200A0A096LPH7 203 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-210ENST00000532935 A0A1W2PS18 150 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 WRBO00258 174 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 DFFBO76075 338 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 TFPI2P48307 235 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 FGL1Q08830 312 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 GBGT1Q8N5D6 347 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 RETNQ9HD89 108 aa11.43□□□□□ -0.58
CPSF1-210ENST00000532935 PAIP2BQ9ULR5 123 aaKnown RBP11.43□□□□□ -0.58
CPSF1-210ENST00000532935 GOSR2O14653 212 aa11.42□□□□□ -0.58
CPSF1-210ENST00000532935 TOMM40O96008 361 aa11.42□□□□□ -0.58
CPSF1-210ENST00000532935 PAFAH1B2P68402 229 aa11.42□□□□□ -0.58
CPSF1-210ENST00000532935 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
CPSF1-210ENST00000532935 ID3Q02535 119 aa11.42□□□□□ -0.58
CPSF1-210ENST00000532935 GAMTQ14353 236 aa11.42□□□□□ -0.58
CPSF1-210ENST00000532935 NARS2Q96I59 477 aaKnown RBP11.42□□□□□ -0.58
CPSF1-210ENST00000532935 CSMD3Q7Z407 3707 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 IL4P05112 153 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 RD3LP0DJH9 198 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 PSG1P11464 419 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 NKX2-1P43699 371 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-210ENST00000532935 P2RY1P47900 373 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 RPL11P62913 178 aaKnown RBP11.41□□□□□ -0.58
CPSF1-210ENST00000532935 SPANXN5Q5MJ07 72 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 OR2T35Q8NGX2 323 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 U3KQE9 123 aa11.41□□□□□ -0.58
CPSF1-210ENST00000532935 IGKV1D-37A0A075B6S9 117 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 H3BP45 60 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-210ENST00000532935 CMC4P56277 68 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-210ENST00000532935 H2BFSP57053 126 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPSF1-210ENST00000532935 USF2Q15853 346 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-210ENST00000532935 GSG1LQ6UXU4 331 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 NMES1Q9C002 83 aa11.4□□□□□ -0.58
CPSF1-210ENST00000532935 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 HMSDA8MTL9 139 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 SSSCA1O60232 199 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 C4BPBP20851 252 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 ZNF90Q03938 601 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
CPSF1-210ENST00000532935 APRG1Q8IVJ8 170 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 GRAMD2BQ96HH9 432 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 MAP6D1Q9H9H5 199 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 STRAPQ9Y3F4 350 aaKnown RBP11.39□□□□□ -0.59
CPSF1-210ENST00000532935 STARD9Q9P2P6 4700 aa11.39□□□□□ -0.59
CPSF1-210ENST00000532935 C3orf84H3BNL1 204 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 APOC4P55056 127 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 ZNF124Q15973 351 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 C16orf54Q6UWD8 224 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 ZBTB8BQ8NAP8 495 aaPredicted RBP11.38□□□□□ -0.59
CPSF1-210ENST00000532935 STXBP6Q8NFX7 210 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 OR51G1Q8NGK1 321 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 RNF125Q96EQ8 232 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 PSENENQ9NZ42 101 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 RABAC1Q9UI14 185 aa11.38□□□□□ -0.59
CPSF1-210ENST00000532935 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 SCGB1D2O95969 90 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 FABP1P07148 127 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
CPSF1-210ENST00000532935 THAP8Q8NA92 274 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 GLMPQ8WWB7 406 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 C2orf50Q96LR7 162 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 TRGV9Q99603 122 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 GSKIPQ9P0R6 139 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 AGRNO00468 2067 aa11.37□□□□□ -0.59
CPSF1-210ENST00000532935 C5orf51A6NDU8 294 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 G3V3Q6 166 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 K7EQG2 157 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 CCSO14618 274 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 PAX9P55771 341 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
CPSF1-210ENST00000532935 KIR2DL5BA0A0G2JN68 375 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 KIR2DL5BA0A0G2JPC4 375 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 HELTA6NFD8 242 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 UBE2CO00762 179 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 BUB3O43684 328 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 SIX6O95475 246 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 NKX2-5P52952 324 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms