RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TMEM144Q7Z5S9 345 aa18.69■□□□□ 0.58
USP48-214ENST00000532737 E5RGE8 158 aa18.68■□□□□ 0.58
USP48-214ENST00000532737 MPC2O95563 127 aa18.68■□□□□ 0.58
USP48-214ENST00000532737 OR2F1Q13607 317 aa18.68■□□□□ 0.58
USP48-214ENST00000532737 USF2Q15853 346 aaPredicted RBP18.68■□□□□ 0.58
USP48-214ENST00000532737 MRAPQ8TCY5 172 aa18.68■□□□□ 0.58
USP48-214ENST00000532737 FNDC10F2Z333 226 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 IL4P05112 153 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 NPPCP23582 126 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 SULT1A1P50225 295 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 SLC38A11Q08AI6 406 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 TMEM217Q8N7C4 229 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 OR51G1Q8NGK1 321 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 METTL26Q96S19 204 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 RNF2Q99496 336 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 GGACTQ9BVM4 153 aa18.67■□□□□ 0.58
USP48-214ENST00000532737 IGHV3-66A0A0C4DH42 116 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 FABP1P07148 127 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 CRYBB3P26998 211 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 P2RY1P47900 373 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 GUCA2BQ16661 112 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 LILRB2Q8N423 598 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 ST8SIA2Q92186 375 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 VSIRQ9H7M9 311 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 NPVFQ9HCQ7 196 aa18.66■□□□□ 0.58
USP48-214ENST00000532737 TRAV25A0A0B4J276 109 aa18.65■□□□□ 0.58
USP48-214ENST00000532737 TMEM182Q6ZP80 229 aaPredicted RBP18.65■□□□□ 0.58
USP48-214ENST00000532737 LSM4Q9Y4Z0 139 aaKnown RBP18.65■□□□□ 0.58
USP48-214ENST00000532737 DEFB121Q5J5C9 76 aa18.64■□□□□ 0.57
USP48-214ENST00000532737 RBPMS2Q6ZRY4 209 aaKnown RBP18.64■□□□□ 0.57
USP48-214ENST00000532737 STX12Q86Y82 276 aa18.64■□□□□ 0.57
USP48-214ENST00000532737 Q8N1Y9 231 aa18.64■□□□□ 0.57
USP48-214ENST00000532737 RNF125Q96EQ8 232 aa18.64■□□□□ 0.57
USP48-214ENST00000532737 U3KQE9 123 aa18.64■□□□□ 0.57
USP48-214ENST00000532737 GATA2P23769 480 aaPredicted RBP18.63■□□□□ 0.57
USP48-214ENST00000532737 PBDC1Q9BVG4 233 aa18.63■□□□□ 0.57
USP48-214ENST00000532737 HNRNPCP07910 306 aaKnown RBP eCLIP18.62■□□□□ 0.571e-10■■■□□ 16.8
USP48-214ENST00000532737 S100A11P31949 105 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 BMI1P35226 326 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 LYZP61626 148 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 EWSR1Q01844 656 aaKnown RBP eCLIP18.62■□□□□ 0.57
USP48-214ENST00000532737 NHLH2Q02577 135 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 FAM90A2PQ658T7 463 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 LAMTOR1Q6IAA8 161 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 CYP2G1PQ6ZSU1 146 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 SLC25A31Q9H0C2 315 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 MBD2Q9UBB5 411 aa18.62■□□□□ 0.57
USP48-214ENST00000532737 A0A1W2PS18 150 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 TSPAN4O14817 238 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 PET100P0DJ07 73 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 HBG1P69891 147 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 HBG2P69892 147 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 TEPPQ6URK8 271 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 TCF24Q7RTU0 167 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 RABAC1Q9UI14 185 aa18.61■□□□□ 0.57
USP48-214ENST00000532737 DFFBO76075 338 aa18.6■□□□□ 0.57
USP48-214ENST00000532737 GIPP09681 153 aaPredicted RBP18.6■□□□□ 0.57
USP48-214ENST00000532737 VWC2Q2TAL6 325 aa18.6■□□□□ 0.57
USP48-214ENST00000532737 BPIFCQ8NFQ6 507 aa18.6■□□□□ 0.57
USP48-214ENST00000532737 NARS2Q96I59 477 aaKnown RBP18.6■□□□□ 0.57
USP48-214ENST00000532737 TMEM147Q9BVK8 224 aa18.6■□□□□ 0.57
USP48-214ENST00000532737 TMEM231Q9H6L2 316 aa18.6■□□□□ 0.57
USP48-214ENST00000532737 UQCC1Q9NVA1 299 aa18.6■□□□□ 0.57
USP48-214ENST00000532737 CFDP00746 253 aaPredicted RBP18.59■□□□□ 0.57
USP48-214ENST00000532737 CD7P09564 240 aa18.59■□□□□ 0.57
USP48-214ENST00000532737 LYL1P12980 280 aa18.59■□□□□ 0.57
USP48-214ENST00000532737 ATP6V1FQ16864 119 aa18.59■□□□□ 0.57
USP48-214ENST00000532737 GTSCR1Q86UQ5 136 aa18.59■□□□□ 0.57
USP48-214ENST00000532737 STPG3Q8N7X2 389 aa18.59■□□□□ 0.57
USP48-214ENST00000532737 SPAG8Q99932 426 aaPredicted RBP18.59■□□□□ 0.57
USP48-214ENST00000532737 IGKV3-7A0A075B6H7 116 aa18.58■□□□□ 0.56
USP48-214ENST00000532737 EIF2B2P49770 351 aaKnown RBP18.58■□□□□ 0.56
USP48-214ENST00000532737 CD81P60033 236 aa18.58■□□□□ 0.56
USP48-214ENST00000532737 Q5BKY6 102 aa18.58■□□□□ 0.56
USP48-214ENST00000532737 MGST2Q99735 147 aa18.58■□□□□ 0.56
USP48-214ENST00000532737 NEURL2Q9BR09 285 aa18.58■□□□□ 0.56
USP48-214ENST00000532737 WDR83OSQ9Y284 106 aa18.58■□□□□ 0.56
USP48-214ENST00000532737 AGPAT2O15120 278 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 BUB3O43684 328 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 SELENOTP62341 195 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 BAXQ07812 192 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 C16orf54Q6UWD8 224 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 OR5C1Q8NGR4 320 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 THAP6Q8TBB0 222 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 ASB13Q8WXK3 278 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 GRAMD2BQ96HH9 432 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 SLC45A2Q9UMX9 530 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 SMAD5-AS1Q9Y6J3 95 aa18.57■□□□□ 0.56
USP48-214ENST00000532737 CD5P06127 495 aa18.56■□□□□ 0.56
USP48-214ENST00000532737 ORM2P19652 201 aa18.56■□□□□ 0.56
USP48-214ENST00000532737 RPL12P30050 165 aaKnown RBP18.56■□□□□ 0.56
USP48-214ENST00000532737 RAP2BP61225 183 aa18.56■□□□□ 0.56
USP48-214ENST00000532737 GBGT1Q8N5D6 347 aa18.56■□□□□ 0.56
USP48-214ENST00000532737 GLMPQ8WWB7 406 aa18.56■□□□□ 0.56
USP48-214ENST00000532737 UBE2L5PA0A1B0GUS4 154 aa18.55■□□□□ 0.56
USP48-214ENST00000532737 TFPI2P48307 235 aa18.55■□□□□ 0.56
USP48-214ENST00000532737 CHAC2Q8WUX2 184 aa18.55■□□□□ 0.56
USP48-214ENST00000532737 HSPB11Q9Y547 144 aa18.55■□□□□ 0.56
USP48-214ENST00000532737 LINC00869P0C866 280 aa18.54■□□□□ 0.56
USP48-214ENST00000532737 RPL11P62913 178 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms