RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 WRBO00258 174 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 PRAF2O60831 178 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 IFNA4P05014 189 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 IAPPP10997 89 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 CRYBB3P26998 211 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 RAB11AP62491 216 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 MAGT1Q9H0U3 335 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
SMG1-203ENST00000532700 TRAV30A0A087WSZ9 112 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 KIR2DL5BA0A0G2JN68 375 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 KIR2DL5BA0A0G2JPC4 375 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 FAM25EA8MYX2 175 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 DEFB131AP59861 70 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 KIR2DL5AQ8N109 375 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 STPG3Q8N7X2 389 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 ZBTB8BQ8NAP8 495 aaPredicted RBP13.06□□□□□ -0.32
SMG1-203ENST00000532700 KIR2DL5BQ8NHK3 375 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 GSKIPQ9P0R6 139 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 U3KQE9 123 aa13.06□□□□□ -0.32
SMG1-203ENST00000532700 C5orf51A6NDU8 294 aa13.05□□□□□ -0.32
SMG1-203ENST00000532700 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
SMG1-203ENST00000532700 P2RY1P47900 373 aa13.05□□□□□ -0.32
SMG1-203ENST00000532700 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
SMG1-203ENST00000532700 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
SMG1-203ENST00000532700 K7EQG2 157 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 UBE2CO00762 179 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 SCGB1D2O95969 90 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 GIG44P09565 113 aaPredicted RBP13.04□□□□□ -0.32
SMG1-203ENST00000532700 NPPCP23582 126 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 OR10J1P30954 320 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 BMI1P35226 326 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 GPX4P36969 197 aaPredicted RBP13.04□□□□□ -0.32
SMG1-203ENST00000532700 POLR2GP62487 172 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMG1-203ENST00000532700 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 RABAC1Q9UI14 185 aa13.04□□□□□ -0.32
SMG1-203ENST00000532700 PAIP2BQ9ULR5 123 aaKnown RBP13.04□□□□□ -0.32
SMG1-203ENST00000532700 CCSO14618 274 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 RPL11P62913 178 aaKnown RBP13.03□□□□□ -0.32
SMG1-203ENST00000532700 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 OR1S2Q8NGQ3 325 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 C2orf50Q96LR7 162 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 METTL26Q96S19 204 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 RAB40CQ96S21 281 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 CSTL1Q9H114 145 aa13.03□□□□□ -0.32
SMG1-203ENST00000532700 STRAPQ9Y3F4 350 aaKnown RBP13.03□□□□□ -0.32
SMG1-203ENST00000532700 IGKV1D-37A0A075B6S9 117 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 SSSCA1O60232 199 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 PTTG1O95997 202 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 SPANXN5Q5MJ07 72 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 GLMPQ8WWB7 406 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 SMIM8Q96KF7 97 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 PSENENQ9NZ42 101 aa13.02□□□□□ -0.33
SMG1-203ENST00000532700 DNASE2O00115 360 aaPredicted RBP13.01□□□□□ -0.33
SMG1-203ENST00000532700 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
SMG1-203ENST00000532700 TAS2R30P59541 319 aa13.01□□□□□ -0.33
SMG1-203ENST00000532700 SLC35E1Q96K37 410 aa13.01□□□□□ -0.33
SMG1-203ENST00000532700 TRAV2A0A0B4J234 112 aa13□□□□□ -0.33
SMG1-203ENST00000532700 CXorf65A6NEN9 183 aa13□□□□□ -0.33
SMG1-203ENST00000532700 DEFB4AO15263 64 aa13□□□□□ -0.33
SMG1-203ENST00000532700 CA1P00915 261 aaPredicted RBP13□□□□□ -0.33
SMG1-203ENST00000532700 MBPP02686 304 aaPredicted RBP13□□□□□ -0.33
SMG1-203ENST00000532700 IL4P05112 153 aa13□□□□□ -0.33
SMG1-203ENST00000532700 C4BPBP20851 252 aa13□□□□□ -0.33
SMG1-203ENST00000532700 YPEL3P61236 119 aaPredicted RBP13□□□□□ -0.33
SMG1-203ENST00000532700 C16orf54Q6UWD8 224 aa13□□□□□ -0.33
SMG1-203ENST00000532700 H3BP45 60 aa12.99□□□□□ -0.33
SMG1-203ENST00000532700 PSG1P11464 419 aa12.99□□□□□ -0.33
SMG1-203ENST00000532700 PAFAH1B2P68402 229 aa12.99□□□□□ -0.33
SMG1-203ENST00000532700 ZNF90Q03938 601 aa12.99□□□□□ -0.33
SMG1-203ENST00000532700 GAMTQ14353 236 aa12.99□□□□□ -0.33
SMG1-203ENST00000532700 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
SMG1-203ENST00000532700 Q8WTZ3 238 aa12.99□□□□□ -0.33
SMG1-203ENST00000532700 L7N2F9 121 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 SSNA1O43805 119 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 TSC22D2O75157 780 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 TOMM40O96008 361 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 HNRNPCP07910 306 aaKnown RBP eCLIP12.98□□□□□ -0.339e-7■□□□□ 9.1
SMG1-203ENST00000532700 PVALBP20472 110 aaPredicted RBP12.98□□□□□ -0.33
SMG1-203ENST00000532700 DEFB1P60022 68 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 VAMP2P63027 116 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 TMEM231Q9H6L2 316 aa12.98□□□□□ -0.33
SMG1-203ENST00000532700 RCL1Q9Y2P8 373 aaKnown RBP12.98□□□□□ -0.33
SMG1-203ENST00000532700 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 A0A1W2PS18 150 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 GOSR2O14653 212 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 JTBO76095 146 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 CD5P06127 495 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 FABP1P07148 127 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 PAX9P55771 341 aa12.97□□□□□ -0.33
SMG1-203ENST00000532700 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms