RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RNF224P0DH78 156 aa12.52□□□□□ -0.41
PCDHA3-202ENST00000532566 HIST3H2BBQ8N257 126 aa12.52□□□□□ -0.41
PCDHA3-202ENST00000532566 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
PCDHA3-202ENST00000532566 Q6ZSR3 168 aa12.52□□□□□ -0.41
PCDHA3-202ENST00000532566 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.41
PCDHA3-202ENST00000532566 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 NUDT3O95989 172 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 FAM71F2Q6NXP2 309 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 PSG1P11464 419 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 CFHR2P36980 270 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 RHOGP84095 191 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 NCOR1P1Q9H4R4 102 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 TPTE2P1Q5T6R2 138 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 FAM53AQ6NSI3 398 aaPredicted RBP12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 PIP4P1Q86T03 277 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 TRGV9Q99603 122 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
PCDHA3-202ENST00000532566 E7EQL1 145 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 APOHP02749 345 aaPredicted RBP12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 NEUROG1Q92886 237 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 NRN1Q9NPD7 142 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 CA1P00915 261 aaPredicted RBP12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 DLX1P56177 255 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 JOSD1Q15040 202 aaPredicted RBP12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 MED13Q9UHV7 2174 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 SNRPD3P62318 126 aaKnown RBP12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 SSBP4Q9BWG4 385 aaPredicted RBP12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 SIGLEC9Q9Y336 463 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 A0A1B0GWJ7 208 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 TSPOP30536 169 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 FAM159AQ6UWV7 190 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 FER1L6-AS1Q8NA97 138 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
PCDHA3-202ENST00000532566 OOSP1A8MZH6 123 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 TDGF1P13385 188 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 Q8TCH9 128 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 BUB1B-PAK6H3BSN5 160 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 CENPVQ7Z7K6 275 aaPredicted RBP12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 F11RQ9Y624 299 aaKnown RBP12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 EFNA4P52798 201 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 PRDM13Q9H4Q3 707 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
PCDHA3-202ENST00000532566 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 KLRD1Q13241 179 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 TMEM14BQ9NUH8 114 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 IGLV3-9A0A075B6K5 115 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 K7ENP7 123 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 CTAG1AP78358 180 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 MLANAQ16655 118 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 ORMDL3Q8N138 153 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 DCAF16Q9NXF7 216 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 ZNRD1Q9P1U0 126 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 IGHV3-11P01762 117 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 AMBPP02760 352 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 COL8A2P25067 703 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 VMO1Q7Z5L0 202 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 DDB2Q92466 427 aa12.48□□□□□ -0.41
PCDHA3-202ENST00000532566 PRR30Q53SZ7 412 aaPredicted RBP12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 MINOS1Q5TGZ0 78 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 NUDT10Q8NFP7 164 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 NUDT11Q96G61 164 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 ZNF414Q96IQ9 312 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 MINOS1-NBL1R4GNA1 71 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 PMS2P5A8MQ11 134 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 KLK15Q9H2R5 256 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 M0R381 172 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 TCF21O43680 179 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 ZNF324O75467 553 aaPredicted RBP12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 C5orf64Q2M2E5 130 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 SLC25A39Q9BZJ4 359 aaPredicted RBP12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 A1L4Q6 167 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 M0R1W7 72 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
PCDHA3-202ENST00000532566 TGFAP01135 160 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 FGF23Q9GZV9 251 aaPredicted RBP12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 A0A1B0GV90 55 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 LY6HO94772 140 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 KRTAP27-1Q3LI81 207 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 TMEM155Q4W5P6 130 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 ASCL2Q99929 193 aa12.46□□□□□ -0.41
PCDHA3-202ENST00000532566 IGKV3-20P01619 116 aa12.46□□□□□ -0.42
PCDHA3-202ENST00000532566 C17orf58Q2M2W7 97 aa12.46□□□□□ -0.42
PCDHA3-202ENST00000532566 C14orf144Q96I85 54 aa12.46□□□□□ -0.42
PCDHA3-202ENST00000532566 VDAC2P45880 294 aaPredicted RBP12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 DUX4L9Q6RFH8 374 aaPredicted RBP12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 ATP5L2Q7Z4Y8 100 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms