RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KRTAP10-11P60412 298 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 DHODHQ02127 395 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 WT1-ASQ06250 92 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 C9orf66Q5T8R8 295 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRIQKQ629K1 86 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZNF57Q68EA5 555 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 CTRB2Q6GPI1 263 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 C19orf35Q6ZS72 473 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 GDPD1Q8N9F7 314 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR10W1Q8NGF6 305 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR1L6Q8NGR2 347 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 DEDD2Q8WXF8 326 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 EEF1AKMT3Q96AZ1 226 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 SEC22AQ96IW7 307 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 TMEM56Q96MV1 263 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 SRRQ9GZT4 340 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 TMEM222Q9H0R3 208 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 NDUFA4L2Q9NRX3 87 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 TMEM14BQ9NUH8 114 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 MSRB1Q9NZV6 116 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 THYN1Q9P016 225 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 KCNIP3Q9Y2W7 256 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 VWFP04275 2813 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGLV11-55A0A075B6I3 123 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 DBX1A6NMT0 343 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 TEX46H3BTG2 121 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 CDS2O95674 445 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGKV1-5P01602 117 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 AKR1C4P17516 323 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 INSL3P51460 131 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 SYNJ2BPP57105 145 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 HSPE1P61604 102 aaKnown RBP4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 PRCDQ00LT1 54 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 EGFEM1PQ0D2K5 195 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 ICAM4Q14773 271 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 IZUMO4Q1ZYL8 232 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 RPEL1Q2QD12 228 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 KLK9Q2XQG4 91 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 TMED4Q7Z7H5 227 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZNF429Q86V71 674 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 MRAPQ8TCY5 172 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR4C12Q96R67 309 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 SLC25A21Q9BQT8 299 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 PDCD10Q9BUL8 212 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 PLEKHA3Q9HB20 300 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 KLK9Q9UKQ9 250 aa4.41□□□□□ -1.7
HMGB1P42-201ENST00000532126 MEGF8Q7Z7M0 2845 aa4.4□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRBV7-1A0A0A6YYK4 115 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 NAP1L6A6NFF2 107 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 CENPXA8MT69 81 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 BMPR1BO00238 502 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 GGCTO75223 188 aaKnown RBP4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM50AO95807 157 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 IFNA17P01571 189 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 IGHV3-23P01764 117 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 P0C879 139 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 IL7P13232 177 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 SRPXP78539 464 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 ERHP84090 104 aaKnown RBP4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 PSG3Q16557 428 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 SMUG1Q53HV7 270 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 CLEC19AQ6UXS0 136 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 SELENOHQ8IZQ5 122 aaKnown RBP4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 SLC35G3Q8N808 338 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 LHFPL5Q8TAF8 219 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 VN1R17PQ8TDU5 208 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 RBPMSQ93062 196 aaKnown RBP4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 IL22RA2Q969J5 263 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM230Q96A57 120 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 GALNT14Q96FL9 552 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 ENY2Q9NPA8 101 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 MBD2Q9UBB5 411 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 F11RQ9Y624 299 aaKnown RBP4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 S4R3C0 116 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM56-RWDD3S4R434 201 aa4.4□□□□□ -1.71
HMGB1P42-201ENST00000532126 A0A0B4J2A0 478 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 A0A0G2JRQ6 117 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 WI2-2373I1.2A0A1W2PRP0 233 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 PPP5D1E7EU14 171 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 K7EIL1 84 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 HLA-AP01891 365 aaKnown RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 GPR183P32249 361 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 SNCAP37840 140 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 AMTP48728 403 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 HOXA1P49639 335 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 CCR6P51684 374 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 MFAP2P55001 183 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 SUPT4H1P63272 117 aaKnown RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM187Q14656 261 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 RBMS2Q15434 407 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms